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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0027]' for entry matching: Q9D051

World-2DPAGE Repository (0027):  Q9D051


General information about the entry
View entry in simple text format
Entry nameODPB_MOUSE
Primary accession numberQ9D051
integrated into World-2DPAGE Repository (0027) on September 30, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Short=PDHE1-B; EC=; Flags: Precursor;.
Gene nameName=Pdhb
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
Blutke A., Block C., Berendt F., Herbach N., Kemter E., Amann K., Frolich T., Arnold G.J., Wanke R.
''Differential glomerular proteome analysis of two murine nephropathy models at onset of albuminuria''
Proteomics - Clinical Applications 5(6):375-381 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

GIPRDN_4-7 {glomerular protein lysates of a GIPRdn-tg animal}
Mus musculus (Mouse)
  map experimental info

pI=5.45; Mw=35000  [identification data]

SPOT 25: Avg ratio GIPRdn-tg vs. control=1.84 (p-value=0.0064) [1].

IDENTIFICATION: SPOT 25: SeqCov=8%. Mascot protein score=62 [1].
MAPPING (identification):
SPOT 25: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Andreas Blutke, Institute of Veterinary Pathology, University Munich, Germany
UniProtKB/Swiss-ProtQ9D051; ODPB_MOUSE.
World-2DPAGE RepositoryQ9D051; ODPB_MOUSE.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameODPB_MOUSE
Primary accession numberQ9D051
Secondary accession number(s) Q3TL86 Q505N8 Q99LW9
Sequence was last modified on June 1, 2001 (version 1)
Annotations were last modified on November 16, 2011 (version 88)
Name and origin of the protein
DescriptionRecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; Short=PDHE1-B; EC=; Flags: Precursor;
Gene nameName=Pdhb
Encoded onName=Pdhb
KeywordsComplete proteome; Direct protein sequencing; Glycolysis; Mitochondrion; Oxidoreductase; Phosphoprotein; Pyruvate; Reference proteome; Thiamine pyrophosphate; Transit peptide.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLAK011810; BAB27855.1; -; mRNA
EMBLAK153058; BAE31684.1; -; mRNA
EMBLAK166631; BAE38906.1; -; mRNA
EMBLBC002188; AAH02188.1; ALT_INIT; mRNA
EMBLBC019512; AAH19512.1; -; mRNA
EMBLBC094468; AAH94468.1; -; mRNA
IPIIPI00132042; -; .
PIRPT0096; PT0096; .
RefSeqNP_077183.1; NM_024221.3; .
UniGeneMm.301527; -; .
ProteinModelPortalQ9D051; -; .
SMRQ9D051; 30-359; .
IntActQ9D051; 5; .
STRINGQ9D051; -; .
PhosphoSiteQ9D051; -; .
UCD-2DPAGEQ9D051; -; .
PRIDEQ9D051; -; .
EnsemblENSMUST00000022268; ENSMUSP00000022268; ENSMUSG00000021748; .
GeneID68263; -; .
KEGGmmu:68263; -; .
UCSCuc007sev.1; mouse; .
CTD5162; -; .
MGIMGI:1915513; Pdhb; .
eggNOGroNOG10273; -; .
GeneTreeENSGT00530000063423; -; .
HOGENOMHBG753264; -; .
HOVERGENHBG000917; -; .
InParanoidQ9D051; -; .
OrthoDBEOG4CJVHD; -; .
PhylomeDBQ9D051; -; .
NextBio326854; -; .
ArrayExpressQ9D051; -; .
BgeeQ9D051; -; .
CleanExMM_PDHB; -; .
GenevestigatorQ9D051; -; .
GermOnlineENSMUSG00000021748; Mus musculus; .
GOGO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell; .
GOGO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; IEA:EC; .
GOGO:0006096; P:glycolysis; IEA:UniProtKB-KW; .
InterProIPR009014; Transketo_C/Pyr-ferredox_oxred; .
InterProIPR015941; Transketolase-like_C; .
InterProIPR005475; Transketolase-like_Pyr-bd; .
InterProIPR005476; Transketolase_C; .
Gene3DG3DSA:; Transketo_C_like; 1; .
KOK00162; -; .
PfamPF02779; Transket_pyr; 1; .
PfamPF02780; Transketolase_C; 1; .
SMARTSM00861; Transket_pyr; 1; .
SUPFAMSSF52922; Transketo_C_like; 1; .

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World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server