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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q9JK72




World-2DPAGE Repository (0030):  Q9JK72


Q9JK72


General information about the entry
View entry in simple text format
Entry nameCCS_RAT
Primary accession numberQ9JK72
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Copper chaperone for superoxide dismutase; AltName: Full=Superoxide dismutase copper chaperone;.
Gene nameName=Ccs
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=6.04; Mw=35504  [identification data]

IDENTIFICATION: SPOT 1847: Mascot protein score=139. Number of peptides=3 [1].
MAPPING (identification):
SPOT 1847: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtQ9JK72; CCS_RAT.
World-2DPAGE RepositoryQ9JK72; CCS_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameCCS_RAT
Primary accession numberQ9JK72
Secondary accession number(s) B0BMW1
Sequence was last modified on October 1, 2000 (version 1)
Annotations were last modified on November 16, 2011 (version 80)
Name and origin of the protein
DescriptionRecName: Full=Copper chaperone for superoxide dismutase; AltName: Full=Superoxide dismutase copper chaperone;
Gene nameName=Ccs
Encoded onName=Ccs
KeywordsChaperone; Complete proteome; Copper; Cytoplasm; Disulfide bond; Metal-binding; Phosphoprotein; Reference proteome; Zinc.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF255305; AAF65572.1; -; mRNA
EMBLBC158586; AAI58587.1; -; mRNA
IPIIPI00202139; -; .
RefSeqNP_445877.1; NM_053425.1; .
UniGeneRn.12311; -; .
ProteinModelPortalQ9JK72; -; .
SMRQ9JK72; 9-237; .
IntActQ9JK72; 1; .
STRINGQ9JK72; -; .
PhosphoSiteQ9JK72; -; .
PRIDEQ9JK72; -; .
EnsemblENSRNOT00000026670; ENSRNOP00000026670; ENSRNOG00000019691; .
GeneID84485; -; .
KEGGrno:84485; -; .
UCSCNM_053425; rat; .
CTD9973; -; .
RGD620403; Ccs; .
eggNOGroNOG08275; -; .
GeneTreeENSGT00530000063226; -; .
HOVERGENHBG018933; -; .
InParanoidQ9JK72; -; .
OrthoDBEOG45TCNZ; -; .
PhylomeDBQ9JK72; -; .
NextBio617016; -; .
ArrayExpressQ9JK72; -; .
GenevestigatorQ9JK72; -; .
GermOnlineENSRNOG00000019691; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IBA:RefGenome; .
GOGO:0005743; C:mitochondrial inner membrane; IBA:RefGenome; .
GOGO:0005634; C:nucleus; IBA:RefGenome; .
GOGO:0019899; F:enzyme binding; IDA:RGD; .
GOGO:0004784; F:superoxide dismutase activity; IEA:InterPro; .
GOGO:0016532; F:superoxide dismutase copper chaperone activity; IBA:RefGenome; .
GOGO:0008270; F:zinc ion binding; IBA:RefGenome; .
GOGO:0015680; P:intracellular copper ion transport; IBA:RefGenome; .
GOGO:0019430; P:removal of superoxide radicals; IBA:RefGenome; .
InterProIPR006121; HeavyMe-assoc_HMA; .
InterProIPR024134; SOD_Cu/Zn_/chaperones; .
InterProIPR018152; SOD_Cu/Zn_BS; .
InterProIPR024142; SOD_Cu_chaperone; .
InterProIPR001424; SOD_Cu_Zn_dom; .
Gene3DG3DSA:2.60.40.200; SOD_Cu_Zn; 1; .
KOK04569; -; .
PANTHERPTHR10003:SF27; PTHR10003:SF27; 1; .
PANTHERPTHR10003; SOD_Cu_Zn; 1; .
PfamPF00403; HMA; 1; .
PfamPF00080; Sod_Cu; 1; .
PRINTSPR00068; CUZNDISMTASE; .
SUPFAMSSF55008; HeavyMe_transpt; 1; .
SUPFAMSSF49329; SOD_Cu_Zn; 1; .
PROSITEPS01047; HMA_1; FALSE_NEG; .
PROSITEPS50846; HMA_2; 1; .
PROSITEPS00087; SOD_CU_ZN_1; FALSE_NEG; .
PROSITEPS00332; SOD_CU_ZN_2; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server