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Searching in 'World-2DPAGE Repository [0019]' for entry matching: Q9JKB7_RAT




World-2DPAGE Repository (0019):  Q9JKB7_RAT

Q9JKB7_RAT


General information about the entry
View entry in simple text format
Entry nameQ9JKB7_RAT
Primary accession numberQ9JKB7
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Guanine deaminase; SubName: Full=Guanine deaminase, isoform CRA_b; SubName: Full=Uncharacterized protein;.
Gene nameName=Gda
ORFNames=rCG_47258
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info 		 
HIPP_SYNAP

MAP LOCATIONS:
pI=5.48; Mw=51438  [identification data]
pI=5.48; Mw=51438  [identification data]
pI=5.48; Mw=51438  [identification data]

IDENTIFICATION: SPOT 471: Peptides number=6. SeqCov=11.7%. MOWSE score=4.24E+4 [1]
SPOT 480: Peptides number=3. SeqCov=6.8%. MOWSE score=8.64E+3 [1]; SPOT 1181: Peptides number=9. SeqCov=20.9%. MOWSE score=5.20E+6 [1].
MAPPING (identification):
SPOT 471: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 480: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1181: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/TrEMBLQ9JKB7; Q9JKB7_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_12
Entry nameQ9JKB7_RAT
Primary accession numberQ9JKB7
Sequence was last modified on October 1, 2000 (version 1)
Annotations were last modified on November 16, 2011 (version 57)
Name and origin of the protein
DescriptionSubName: Full=Guanine deaminase; SubName: Full=Guanine deaminase, isoform CRA_b; SubName: Full=Uncharacterized protein;
Gene nameName=Gda
ORFNames=rCG_47258
Encoded onName=Gda; ORFNames=rCG_47258
KeywordsComplete proteome; Reference proteome.
Cross-references
EMBLAF245172; AAF63337.1; -; mRNA
EMBLCH473953; EDM13004.1; -; Genomic_DNA
IPIIPI00851130; -; .
RefSeqNP_113964.2; NM_031776.2; .
UniGeneRn.161897; -; .
ProteinModelPortalQ9JKB7; -; .
SMRQ9JKB7; 9-451; .
STRINGQ9JKB7; -; .
EnsemblENSRNOT00000024775; ENSRNOP00000024775; ENSRNOG00000018282; .
GeneID83585; -; .
KEGGrno:83585; -; .
CTD9615; -; .
RGD621617; Gda; .
eggNOGroNOG09521; -; .
HOVERGENHBG005930; -; .
InParanoidQ9JKB7; -; .
OMACFKPCEI; -; .
NextBio616127; -; .
ArrayExpressQ9JKB7; -; .
GenevestigatorQ9JKB7; -; .
GOGO:0008270; F:zinc ion binding; IEA:InterPro; .
InterProIPR006680; Amidohydro_1; .
InterProIPR014311; Guanine_deaminase; .
KOK01487; -; .
PANTHERPTHR11271:SF6; Guanine_deaminase; 1; .
PfamPF01979; Amidohydro_1; 1; .
TIGRFAMsTIGR02967; Guan_deamin; 1; .


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