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Searching in 'World-2DPAGE Repository [0030]' for entry matching: Q9Z0U8_RAT

World-2DPAGE Repository (0030):  Q9Z0U8_RAT


General information about the entry
View entry in simple text format
Entry nameQ9Z0U8_RAT
Primary accession numberQ9Z0U8
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Nucleic acid binding factor pRM10;.
Gene nameName=Hnrnpab
Synonyms=Hnrpab, pRM10
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=6.36; Mw=50382  [identification data]
pI=6.66; Mw=48939  [identification data]

IDENTIFICATION: SPOT 1368: Mascot protein score=49. Number of peptides=3 [1]
SPOT 1410: Mascot protein score=101. Number of peptides=5 [1].
MAPPING (identification):
SPOT 1368: Tandem mass spectrometry [1];
SPOT 1410: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
World-2DPAGE RepositoryQ9Z0U8; Q9Z0U8_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameQ9Z0U8_RAT
Primary accession numberQ9Z0U8
Sequence was last modified on May 1, 1999 (version 1)
Annotations were last modified on October 19, 2011 (version 63)
Name and origin of the protein
DescriptionSubName: Full=Nucleic acid binding factor pRM10;
Gene nameName=Hnrnpab
Synonyms=Hnrpab, pRM10
Encoded onName=Hnrnpab; Synonyms=Hnrpab, pRM10
KeywordsName=Hnrnpab; Synonyms=Hnrpab, pRM10.
EMBLAF108653; AAD19638.1; -; mRNA
IPIIPI00208193; -; .
PIRPC4375; PC4375; .
PIRPC4376; PC4376; .
PIRPC4377; PC4377; .
UniGeneRn.1427; -; .
HSSPQ14103; 1HD1; .
ProteinModelPortalQ9Z0U8; -; .
SMRQ9Z0U8; 89-163; 171-247; .
IntActQ9Z0U8; 1; .
MINTMINT-7138483; -; .
STRINGQ9Z0U8; -; .
PRIDEQ9Z0U8; -; .
RGD69255; Hnrnpab; .
HOVERGENHBG002295; -; .
GenevestigatorQ9Z0U8; -; .
GOGO:0003688; F:DNA replication origin binding; IDA:RGD; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0045892; P:negative regulation of transcription; DNA-dependent; IDA:RGD
InterProIPR012956; CARG-binding_factor_N; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
Gene3DG3DSA:; a_b_plait_nuc_bd; 2; .
PfamPF08143; CBFNT; 1; .
PfamPF00076; RRM_1; 2; .
SMARTSM00360; RRM; 2; .
PROSITEPS50102; RRM; 2; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server