World-2DPAGE Repository

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.200900680; Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of whole cerebellum of the mature rat'' Proteomics 10(23):4311-4319 (2010)

2D PAGE maps for identified proteins

How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum

map experimental info

RAT_CEREBELLUM_21D

MAP LOCATIONS:

SPOT 3107:

pI=5.49; Mw=31000

[identification data]

IDENTIFICATION: SPOT 3107: SeqCov=39%. MascotPMF=74 [1].
MAPPING (identification):

SPOT 3107: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

PRIDE

10017.

UniProtKB/Swiss-Prot

Q9Z0W7; CLIC4_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry name	CLIC4_RAT
Primary accession number	Q9Z0W7
Sequence was last modified on	January 23, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 91)
Name and origin of the protein
Description	RecName: Full=Chloride intracellular channel protein 4; AltName: Full=Intracellular chloride ion channel protein p64H1;
Gene name	Name=Clic4
Encoded on	Name=Clic4
Keywords	Acetylation; Cell membrane; Chloride; Chloride channel; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Endoplasmic reticulum; Ion transport; Ionic channel; Membrane; Nucleus; Reference proteome; Transmembrane; Transmembrane helix; Transport; Voltage-gated channel.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	AF104119; AAD16875.1; -; mRNA
IPI	IPI00208249; -; .
PIR	S70484; S70484; .
RefSeq	NP_114006.1; NM_031818.1; .
UniGene	Rn.104756; -; .
ProteinModelPortal	Q9Z0W7; -; .
SMR	Q9Z0W7; 6-253; .
STRING	Q9Z0W7; -; .
PhosphoSite	Q9Z0W7; -; .
World-2DPAGE	0004:Q9Z0W7; -; .
PRIDE	Q9Z0W7; -; .
GeneID	83718; -; .
KEGG	rno:83718; -; .
UCSC	NM_031818; rat; .
CTD	25932; -; .
RGD	61857; Clic4; .
GeneTree	ENSGT00550000074477; -; .
HOVERGEN	HBG050994; -; .
InParanoid	Q9Z0W7; -; .
OrthoDB	EOG40S0FN; -; .
NextBio	616289; -; .
ArrayExpress	Q9Z0W7; -; .
Genevestigator	Q9Z0W7; -; .
GermOnline	ENSRNOG00000018109; Rattus norvegicus; .
GO	GO:0034707; C:chloride channel complex; IEA:UniProtKB-KW; .
GO	GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell; .
GO	GO:0005783; C:endoplasmic reticulum; TAS:UniProtKB; .
GO	GO:0005902; C:microvillus; ISS:UniProtKB; .
GO	GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; .
GO	GO:0005625; C:soluble fraction; ISS:UniProtKB; .
GO	GO:0005515; F:protein binding; IPI:RGD; .
GO	GO:0005247; F:voltage-gated chloride channel activity; IEA:InterPro; .
GO	GO:0030336; P:negative regulation of cell migration; ISS:UniProtKB; .
InterPro	IPR010987; Glutathione-S-Trfase_C-like; .
InterPro	IPR017933; Glutathione_S_Trfase/Cl_chnl_C; .
InterPro	IPR002946; Int_Cl_channel; .
InterPro	IPR012336; Thioredoxin-like_fold; .
Gene3D	G3DSA:1.20.1050.10; GST_C_like; 1; .
Gene3D	G3DSA:3.40.30.10; Thioredoxin_fold; 1; .
KO	K05024; -; .
PRINTS	PR01263; INTCLCHANNEL; .
SUPFAM	SSF47616; GST_C_like; 1; .
SUPFAM	SSF52833; Thiordxn-like_fd; 1; .
TIGRFAMs	TIGR00862; O-ClC; 1; .
PROSITE	PS50405; GST_CTER; 1; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

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