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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
Q9Z0W7
World-2DPAGE Repository
(0014):
Q9Z0W7
Q9Z0W7
General information about the entry
View entry in simple text format
Entry name
CLIC4_RAT
Primary accession number
Q9Z0W7
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Chloride intracellular channel protein 4; AltName: Full=Intracellular chloride ion channel protein p64H1;.
Gene name
Name=Clic4
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3107
:
pI=5.49; Mw=31000
[identification data]
IDENTIFICATION:
SPOT 3107: SeqCov=39%. MascotPMF=74 [
1
].
MAPPING (identification):
SPOT
3107
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
Q9Z0W7; CLIC4_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
CLIC4_RAT
Primary accession number
Q9Z0W7
Sequence was last modified on
January 23, 2007 (version 3)
Annotations were last modified on
November 16, 2011 (version 91)
Name and origin of the protein
Description
RecName: Full=Chloride intracellular channel protein 4; AltName: Full=Intracellular chloride ion channel protein p64H1;
Gene name
Name=Clic4
Encoded on
Name=Clic4
Keywords
Acetylation
;
Cell membrane
;
Chloride
;
Chloride channel
;
Complete proteome
;
Cytoplasm
;
Cytoplasmic vesicle
;
Endoplasmic reticulum
;
Ion transport
;
Ionic channel
;
Membrane
;
Nucleus
;
Reference proteome
;
Transmembrane
;
Transmembrane helix
;
Transport
;
Voltage-gated channel
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AF104119; AAD16875.1
; -; mRNA
IPI
IPI00208249; -
; .
PIR
S70484; S70484
; .
RefSeq
NP_114006.1; NM_031818.1
; .
UniGene
Rn.104756; -
; .
ProteinModelPortal
Q9Z0W7; -
; .
SMR
Q9Z0W7; 6-253
; .
STRING
Q9Z0W7; -
; .
PhosphoSite
Q9Z0W7; -
; .
World-2DPAGE
0004:Q9Z0W7; -
; .
PRIDE
Q9Z0W7; -
; .
GeneID
83718; -
; .
KEGG
rno:83718; -
; .
UCSC
NM_031818; rat
; .
CTD
25932; -
; .
RGD
61857; Clic4
; .
GeneTree
ENSGT00550000074477; -
; .
HOVERGEN
HBG050994; -
; .
InParanoid
Q9Z0W7; -
; .
OrthoDB
EOG40S0FN; -
; .
NextBio
616289; -
; .
ArrayExpress
Q9Z0W7; -
; .
Genevestigator
Q9Z0W7; -
; .
GermOnline
ENSRNOG00000018109; Rattus norvegicus
; .
GO
GO:0034707; C:chloride channel complex
; IEA:UniProtKB-KW; .
GO
GO:0030659; C:cytoplasmic vesicle membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0005783; C:endoplasmic reticulum
; TAS:UniProtKB; .
GO
GO:0005902; C:microvillus
; ISS:UniProtKB; .
GO
GO:0005886; C:plasma membrane
; IEA:UniProtKB-SubCell; .
GO
GO:0005625; C:soluble fraction
; ISS:UniProtKB; .
GO
GO:0005515; F:protein binding
; IPI:RGD; .
GO
GO:0005247; F:voltage-gated chloride channel activity
; IEA:InterPro; .
GO
GO:0030336; P:negative regulation of cell migration
; ISS:UniProtKB; .
InterPro
IPR010987; Glutathione-S-Trfase_C-like
; .
InterPro
IPR017933; Glutathione_S_Trfase/Cl_chnl_C
; .
InterPro
IPR002946; Int_Cl_channel
; .
InterPro
IPR012336; Thioredoxin-like_fold
; .
Gene3D
G3DSA:1.20.1050.10; GST_C_like
; 1; .
Gene3D
G3DSA:3.40.30.10; Thioredoxin_fold
; 1; .
KO
K05024; -
; .
PRINTS
PR01263; INTCLCHANNEL
; .
SUPFAM
SSF47616; GST_C_like
; 1; .
SUPFAM
SSF52833; Thiordxn-like_fd
; 1; .
TIGRFAMs
TIGR00862; O-ClC
; 1; .
PROSITE
PS50405; GST_CTER
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server