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Searching in 'World-2DPAGE Repository [0030]' for entry matching: RBM4B_RAT




World-2DPAGE Repository (0030):  RBM4B_RAT


RBM4B_RAT


General information about the entry
View entry in simple text format
Entry nameRBM4B_RAT
Primary accession numberQ64LC9
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding motif protein 30; AltName: Full=RNA-binding motif protein 4B; AltName: Full=RNA-binding protein 30; AltName: Full=Zinc-responsive protein ZD7;.
Gene nameName=Rbm4b
Synonyms=Rbm30
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info
 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=6.36; Mw=50382  [identification data]
pI=6.35; Mw=48872  [identification data]

IDENTIFICATION: SPOT 1368: Mascot protein score=105. Number of peptides=3 [1]
SPOT 1417: Mascot protein score=55. Number of peptides=2 [1].
MAPPING (identification):
SPOT 1368: Tandem mass spectrometry [1];
SPOT 1417: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtQ64LC9; RBM4B_RAT.
World-2DPAGE RepositoryQ64LC9; RBM4B_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameRBM4B_RAT
Primary accession numberQ64LC9
Secondary accession number(s) Q5U1X3
Sequence was last modified on April 12, 2005 (version 2)
Annotations were last modified on November 16, 2011 (version 62)
Name and origin of the protein
DescriptionRecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding motif protein 30; AltName: Full=RNA-binding motif protein 4B; AltName: Full=RNA-binding protein 30; AltName: Full=Zinc-responsive protein ZD7;
Gene nameName=Rbm4b
Synonyms=Rbm30
Encoded onName=Rbm4b; Synonyms=Rbm30
KeywordsActivator; Complete proteome; Metal-binding; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; RNA-binding; Zinc; Zinc-finger.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAY303541; AAQ73500.1; -; mRNA
EMBLBC086416; AAH86416.1; -; mRNA
IPIIPI00471747; -; .
RefSeqNP_001007015.2; NM_001007014.2; .
UniGeneRn.203522; -; .
ProteinModelPortalQ64LC9; -; .
SMRQ64LC9; 1-155; .
IntActQ64LC9; 1; .
STRINGQ64LC9; -; .
EnsemblENSRNOT00000026605; ENSRNOP00000026605; ENSRNOG00000019650; .
GeneID474154; -; .
KEGGrno:474154; -; .
NMPDRfig|10116.3.peg.3462; -; .
UCSCNM_001007014; rat; .
CTD83759; -; .
RGD1359343; Rbm4b; .
eggNOGroNOG07698; -; .
GeneTreeENSGT00390000020883; -; .
HOVERGENHBG062217; -; .
InParanoidQ64LC9; -; .
OMAVYYNDAY; -; .
OrthoDBEOG4NP74W; -; .
PhylomeDBQ64LC9; -; .
NextBio697196; -; .
ArrayExpressQ64LC9; -; .
GenevestigatorQ64LC9; -; .
GermOnlineENSRNOG00000019650; Rattus norvegicus; .
GOGO:0005730; C:nucleolus; IEA:UniProtKB-SubCell; .
GOGO:0000166; F:nucleotide binding; IEA:InterPro; .
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GOGO:0008270; F:zinc ion binding; IEA:InterPro; .
GOGO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB; .
GOGO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB; .
GOGO:0006397; P:mRNA processing; IEA:UniProtKB-KW; .
GOGO:0006417; P:regulation of translation; ISS:UniProtKB; .
GOGO:0008380; P:RNA splicing; IEA:UniProtKB-KW; .
InterProIPR012677; Nucleotide-bd_a/b_plait; .
InterProIPR000504; RRM_dom; .
InterProIPR013084; Znf_CCH_retrovir; .
InterProIPR001878; Znf_CCHC; .
Gene3DG3DSA:3.30.70.330; a_b_plait_nuc_bd; 2; .
Gene3DG3DSA:4.10.60.10; Znf_CCH_retrovir; 1; .
KOK13187; -; .
PfamPF00076; RRM_1; 2; .
PfamPF00098; zf-CCHC; 1; .
SMARTSM00360; RRM; 2; .
SMARTSM00343; ZnF_C2HC; 1; .
PROSITEPS50102; RRM; 2; .
PROSITEPS50158; ZF_CCHC; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server