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Searching in 'World-2DPAGE Repository [0022]' for entry matching: RMD1_RAT




World-2DPAGE Repository (0022):  RMD1_RAT

RMD1_RAT


General information about the entry
View entry in simple text format
Entry nameRMD1_RAT
Primary accession numberQ4G069
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Regulator of microtubule dynamics protein 1; Short=RMD-1; AltName: Full=Protein FAM82B;.
Gene nameName=Fam82b
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=7.60; Mw=35663  [identification data]

IDENTIFICATION: SPOT 148: SeqCov=36.1%. Peptides MS=9/20. Mascot PMF Score=92 [1].
MAPPING (identification):
SPOT 148: Peptide mass fingerprinting [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtQ4G069; RMD1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameRMD1_RAT
Primary accession numberQ4G069
Sequence was last modified on August 30, 2005 (version 1)
Annotations were last modified on September 21, 2011 (version 45)
Name and origin of the protein
DescriptionRecName: Full=Regulator of microtubule dynamics protein 1; Short=RMD-1; AltName: Full=Protein FAM82B;
Gene nameName=Fam82b
Encoded onName=Fam82b
KeywordsComplete proteome; Cytoplasm; Cytoskeleton; Microtubule; Reference proteome; Repeat; TPR repeat.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLBC098713; AAH98713.1; -; mRNA
IPIIPI00369006; -; .
RefSeqNP_001026833.1; NM_001031663.1; .
UniGeneRn.205878; -; .
ProteinModelPortalQ4G069; -; .
PhosphoSiteQ4G069; -; .
PRIDEQ4G069; -; .
EnsemblENSRNOT00000036050; ENSRNOP00000030229; ENSRNOG00000025145; .
GeneID500419; -; .
KEGGrno:500419; -; .
UCSCNM_001031663; rat; .
CTD51115; -; .
RGD1563085; Fam82b; .
eggNOGroNOG08957; -; .
GeneTreeENSGT00530000063162; -; .
HOVERGENHBG080276; -; .
InParanoidQ4G069; -; .
OMAKWYAICL; -; .
OrthoDBEOG46DM3V; -; .
NextBio706151; -; .
GenevestigatorQ4G069; -; .
GOGO:0005874; C:microtubule; IEA:UniProtKB-KW; .
GOGO:0000922; C:spindle pole; IEA:UniProtKB-SubCell; .
GOGO:0005488; F:binding; IEA:InterPro; .
InterProIPR011990; TPR-like_helical; .
Gene3DG3DSA:1.25.40.10; TPR-like_helical; 2; .
PROSITEPS50005; TPR; FALSE_NEG; .
PROSITEPS50293; TPR_REGION; FALSE_NEG; .


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