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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
RMD1_RAT
World-2DPAGE Repository
(0022):
RMD1_RAT
RMD1_RAT
General information about the entry
View entry in simple text format
Entry name
RMD1_RAT
Primary accession number
Q4G069
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Regulator of microtubule dynamics protein 1; Short=RMD-1; AltName: Full=Protein FAM82B;.
Gene name
Name=Fam82b
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 148
:
pI=7.60; Mw=35663
[identification data]
IDENTIFICATION:
SPOT 148: SeqCov=36.1%. Peptides MS=9/20. Mascot PMF Score=92 [
1
].
MAPPING (identification):
SPOT
148
:
Peptide mass fingerprinting
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
Q4G069; RMD1_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
RMD1_RAT
Primary accession number
Q4G069
Sequence was last modified on
August 30, 2005 (version 1)
Annotations were last modified on
September 21, 2011 (version 45)
Name and origin of the protein
Description
RecName: Full=Regulator of microtubule dynamics protein 1; Short=RMD-1; AltName: Full=Protein FAM82B;
Gene name
Name=Fam82b
Encoded on
Name=Fam82b
Keywords
Complete proteome
;
Cytoplasm
;
Cytoskeleton
;
Microtubule
;
Reference proteome
;
Repeat
;
TPR repeat
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
BC098713; AAH98713.1
; -; mRNA
IPI
IPI00369006; -
; .
RefSeq
NP_001026833.1; NM_001031663.1
; .
UniGene
Rn.205878; -
; .
ProteinModelPortal
Q4G069; -
; .
PhosphoSite
Q4G069; -
; .
PRIDE
Q4G069; -
; .
Ensembl
ENSRNOT00000036050; ENSRNOP00000030229
; ENSRNOG00000025145; .
GeneID
500419; -
; .
KEGG
rno:500419; -
; .
UCSC
NM_001031663; rat
; .
CTD
51115; -
; .
RGD
1563085; Fam82b
; .
eggNOG
roNOG08957; -
; .
GeneTree
ENSGT00530000063162; -
; .
HOVERGEN
HBG080276; -
; .
InParanoid
Q4G069; -
; .
OMA
KWYAICL; -
; .
OrthoDB
EOG46DM3V; -
; .
NextBio
706151; -
; .
Genevestigator
Q4G069; -
; .
GO
GO:0005874; C:microtubule
; IEA:UniProtKB-KW; .
GO
GO:0000922; C:spindle pole
; IEA:UniProtKB-SubCell; .
GO
GO:0005488; F:binding
; IEA:InterPro; .
InterPro
IPR011990; TPR-like_helical
; .
Gene3D
G3DSA:1.25.40.10; TPR-like_helical
; 2; .
PROSITE
PS50005; TPR
; FALSE_NEG; .
PROSITE
PS50293; TPR_REGION
; FALSE_NEG; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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package (
ver. 3.10.2
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