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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0030]' for entry matching: RSSA_RAT World-2DPAGE Repository (0030):  RSSA_RAT RSSA_RAT General information about the entry View entry in simple text format Entry name RSSA_RAT Primary accession number P38983 integrated into World-2DPAGE Repository (0030) on  November 9, 2010 (release 1) 2D Annotations were last modified on June 21, 2011 (version 2) General Annotations were last modified on  November 23, 2011 (version 2) Name and origin of the protein Description RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein p40; Short=LBP/p40;. Gene name Name=Rpsa Synonyms=Lamr1 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011) 2D PAGE maps for identified proteins How to interpret a protein RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7} Rattus norvegicus (Rat)   map experimental info   RAT_INS1E_4-7 MAP LOCATIONS: SPOT 1345: pI=4.63; Mw=50942   [identification data] SPOT 1349: pI=4.67; Mw=50942   [identification data] SPOT 1350: pI=4.56; Mw=50802   [identification data] IDENTIFICATION: SPOT 1345: Mascot protein score=239. Number of peptides=5 [1] SPOT 1349: Mascot protein score=344. Number of peptides=7 [1]; SPOT 1350: Mascot protein score=183. Number of peptides=5 [1]. MAPPING (identification): SPOT 1345: Tandem mass spectrometry [1]; SPOT 1349: Tandem mass spectrometry [1]; SPOT 1350: Tandem mass spectrometry [1]. Copyright Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium Cross-references UniProtKB/Swiss-Prot P38983; RSSA_RAT. World-2DPAGE Repository P38983; RSSA_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name RSSA_RAT Primary accession number P38983 Secondary accession number(s) B6ZB78 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  November 16, 2011 (version 97) Name and origin of the protein Description RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40; Gene name Name=Rpsa Synonyms=Lamr1 Encoded on Name=Rpsa; Synonyms=Lamr1 Keywords Acetylation; Cell membrane; Complete proteome; Cytoplasm; Direct protein sequencing; Membrane; Nucleus; Phosphoprotein; Receptor; Reference proteome; Repeat; Ribonucleoprotein; Ribosomal protein. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL D25224; BAA04953.1; -; mRNA EMBL FJ386454; ACJ13448.1; -; mRNA EMBL BC060578; AAH60578.1; -; mRNA EMBL U04942; AAB60453.1; -; mRNA EMBL M27798; AAA41509.1; -; mRNA IPI IPI00215107; -; . PIR S42405; S42405; . RefSeq NP_058834.1; NM_017138.1; . UniGene Rn.121972; -; . UniGene Rn.161973; -; . UniGene Rn.999; -; . ProteinModelPortal P38983; -; . SMR P38983; 9-205; . IntAct P38983; 2; . MINT MINT-4568881; -; . STRING P38983; -; . PhosphoSite P38983; -; . PRIDE P38983; -; . Ensembl ENSRNOT00000025225; ENSRNOP00000025224; ENSRNOG00000018645; . GeneID 29236; -; . KEGG rno:29236; -; . NMPDR fig|10116.3.peg.29466; -; . UCSC NM_017138; rat; . CTD 3921; -; . RGD 71026; Rpsa; . eggNOG maNOG11981; -; . GeneTree ENSGT00390000015036; -; . HOVERGEN HBG054466; -; . InParanoid P38983; -; . OMA TDAQAIK; -; . OrthoDB EOG40ZQZ6; -; . PhylomeDB P38983; -; . NextBio 608498; -; . ArrayExpress P38983; -; . Genevestigator P38983; -; . GermOnline ENSRNOG00000018645; Rattus norvegicus; . GO GO:0030686; C:90S preribosome; IBA:RefGenome; . GO GO:0005604; C:basement membrane; IDA:RGD; . GO GO:0022627; C:cytosolic small ribosomal subunit; IDA:RGD; . GO GO:0005624; C:membrane fraction; IDA:RGD; . GO GO:0043025; C:neuronal cell body; IDA:RGD; . GO GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; . GO GO:0005886; C:plasma membrane; ISS:UniProtKB; . GO GO:0005055; F:laminin receptor activity; TAS:RGD; . GO GO:0003735; F:structural constituent of ribosome; IBA:RefGenome; . GO GO:0016337; P:cell-cell adhesion; IDA:RGD; . GO GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA; 5.8S rRNA; LSU-rRNA) IBA:RefGenome . GO GO:0000461; P:endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA; 5.8S rRNA; LSU-rRNA) IBA:RefGenome . GO GO:0030855; P:epithelial cell differentiation; IEP:RGD; . GO GO:0000028; P:ribosomal small subunit assembly; IBA:RefGenome; . GO GO:0006407; P:rRNA export from nucleus; IBA:RefGenome; . GO GO:0006412; P:translation; IBA:RefGenome; . InterPro IPR001865; Ribosomal_S2; . InterPro IPR018130; Ribosomal_S2_CS; . InterPro IPR005707; Ribosomal_S2_euk/arc; . InterPro IPR023591; Ribosomal_S2_flav_dom; . KO K02998; -; . PANTHER PTHR11489; Ribosomal_S2_e/a; 1; . Pfam PF00318; Ribosomal_S2; 1; . PRINTS PR00395; RIBOSOMALS2; . SUPFAM SSF52313; Ribosomal_S2; 1; . TIGRFAMs TIGR01012; Sa_S2_E_A; 1; . PROSITE PS00962; RIBOSOMAL_S2_1; 1; . PROSITE PS00963; RIBOSOMAL_S2_2; 1; . World-2DPAGE Repository (search AC)