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Searching in 'World-2DPAGE Repository [0004]' for entry matching: RUVB1_RAT




World-2DPAGE Repository (0004):  RUVB1_RAT

RUVB1_RAT


General information about the entry
View entry in simple text format
Entry nameRUVB1_RAT
Primary accession numberP60123
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=RuvB-like 1; EC=3.6.4.12; AltName: Full=49 kDa TATA box-binding protein-interacting protein; Short=49 kDa TBP-interacting protein; AltName: Full=DNA helicase p50; AltName: Full=Pontin 52; AltName: Full=TIP49a;.
Gene nameName=Ruvbl1
Synonyms=Tip49, Tip49a
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=6.30; Mw=50000  [identification data]

MAPPING (identification):
SPOT 347: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtP60123; RUVB1_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameRUVB1_RAT
Primary accession numberP60123
Secondary accession number(s) O35753
Sequence was last modified on November 28, 2003 (version 1)
Annotations were last modified on November 16, 2011 (version 77)
Name and origin of the protein
DescriptionRecName: Full=RuvB-like 1; EC=3.6.4.12; AltName: Full=49 kDa TATA box-binding protein-interacting protein; Short=49 kDa TBP-interacting protein; AltName: Full=DNA helicase p50; AltName: Full=Pontin 52; AltName: Full=TIP49a;
Gene nameName=Ruvbl1
Synonyms=Tip49, Tip49a
Encoded onName=Ruvbl1; Synonyms=Tip49, Tip49a
KeywordsAcetylation; Activator; ATP-binding; Cell cycle; Cell division; Chromatin regulator; Complete proteome; Direct protein sequencing; DNA damage; DNA recombination; DNA repair; Growth regulation; Helicase; Hydrolase; Mitosis; Nucleotide-binding; Nucleus; Reference proteome; Transcription; Transcription regulation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAB002406; BAA20875.1; -; mRNA
EMBLAB001581; BAA76313.1; -; mRNA
EMBLBC072511; AAH72511.1; -; mRNA
EMBLBC086531; AAH86531.1; -; mRNA
IPIIPI00212268; -; .
PIRJC5521; JC5521; .
RefSeqNP_671706.1; NM_147177.1; .
UniGeneRn.86410; -; .
ProteinModelPortalP60123; -; .
SMRP60123; 7-449; .
IntActP60123; 1; .
MINTMINT-4133484; -; .
STRINGP60123; -; .
World-2DPAGE0004:P60123; -; .
PRIDEP60123; -; .
EnsemblENSRNOT00000018339; ENSRNOP00000018339; ENSRNOG00000013195; .
GeneID65137; -; .
KEGGrno:65137; -; .
UCSCNM_147177; rat; .
CTD8607; -; .
RGD68373; Ruvbl1; .
eggNOGmaNOG08882; -; .
GeneTreeENSGT00550000075043; -; .
HOVERGENHBG054186; -; .
InParanoidP60123; -; .
OMAVHKKKEV; -; .
OrthoDBEOG46Q6SH; -; .
PhylomeDBP60123; -; .
NextBio613955; -; .
ArrayExpressP60123; -; .
GenevestigatorP60123; -; .
GermOnlineENSRNOG00000013195; Rattus norvegicus; .
GOGO:0071339; C:MLL1 complex; ISS:UniProtKB; .
GOGO:0035267; C:NuA4 histone acetyltransferase complex; ISS:UniProtKB; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0003678; F:DNA helicase activity; IEA:InterPro; .
GOGO:0051301; P:cell division; IEA:UniProtKB-KW; .
GOGO:0006310; P:DNA recombination; IEA:UniProtKB-KW; .
GOGO:0006281; P:DNA repair; IEA:UniProtKB-KW; .
GOGO:0043968; P:histone H2A acetylation; ISS:UniProtKB; .
GOGO:0043967; P:histone H4 acetylation; ISS:UniProtKB; .
GOGO:0007067; P:mitosis; IEA:UniProtKB-KW; .
GOGO:0040008; P:regulation of growth; IEA:UniProtKB-KW; .
GOGO:0006355; P:regulation of transcription; DNA-dependent; IEA:UniProtKB-KW
GOGO:0006351; P:transcription; DNA-dependent; IEA:UniProtKB-KW
InterProIPR003593; ATPase_AAA+_core; .
InterProIPR016027; NA-bd_OB-fold-like; .
InterProIPR010339; TIP49_C; .
KOK04499; -; .
PfamPF06068; TIP49; 1; .
SMARTSM00382; AAA; 1; .
SUPFAMSSF50249; Nucleic_acid_OB; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server