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World-2DPAGE Repository

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Searching in 'World-2DPAGE Repository [0030]' for entry matching: SERB_RAT

World-2DPAGE Repository (0030):  SERB_RAT


General information about the entry
View entry in simple text format
Entry nameSERB_RAT
Primary accession numberQ5M819
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Phosphoserine phosphatase; Short=PSP; Short=PSPase; EC=; AltName: Full=O-phosphoserine phosphohydrolase;.
Gene nameName=Psph
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
  map experimental info

pI=5.43; Mw=28180  [identification data]

IDENTIFICATION: SPOT 2140: Mascot protein score=199. Number of peptides=6 [1].
MAPPING (identification):
SPOT 2140: Tandem mass spectrometry [1].

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
UniProtKB/Swiss-ProtQ5M819; SERB_RAT.
World-2DPAGE RepositoryQ5M819; SERB_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameSERB_RAT
Primary accession numberQ5M819
Sequence was last modified on February 1, 2005 (version 1)
Annotations were last modified on November 16, 2011 (version 59)
Name and origin of the protein
DescriptionRecName: Full=Phosphoserine phosphatase; Short=PSP; Short=PSPase; EC=; AltName: Full=O-phosphoserine phosphohydrolase;
Gene nameName=Psph
Encoded onName=Psph
KeywordsAcetylation; Amino-acid biosynthesis; Complete proteome; Hydrolase; Magnesium; Metal-binding; Phosphoprotein; Reference proteome; Serine biosynthesis.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLBC088310; AAH88310.1; -; mRNA
IPIIPI00188112; -; .
RefSeqNP_001009679.1; NM_001009679.1; .
UniGeneRn.8734; -; .
ProteinModelPortalQ5M819; -; .
SMRQ5M819; 4-225; .
IntActQ5M819; 1; .
STRINGQ5M819; -; .
EnsemblENSRNOT00000001228; ENSRNOP00000001228; ENSRNOG00000000925; .
GeneID304429; -; .
KEGGrno:304429; -; .
NMPDRfig|10116.3.peg.8465; -; .
UCSCNM_001009679; rat; .
CTD5723; -; .
RGD1308764; Psph; .
eggNOGmaNOG12671; -; .
GeneTreeENSGT00390000003115; -; .
HOVERGENHBG057486; -; .
InParanoidQ5M819; -; .
OrthoDBEOG4NVZM5; -; .
PhylomeDBQ5M819; -; .
BioCycMetaCyc:MONOMER-10301; -; .
NextBio653036; -; .
ArrayExpressQ5M819; -; .
GenevestigatorQ5M819; -; .
GermOnlineENSRNOG00000000925; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IBA:RefGenome; .
GOGO:0019717; C:synaptosome; IDA:RGD; .
GOGO:0005509; F:calcium ion binding; ISS:UniProtKB; .
GOGO:0000287; F:magnesium ion binding; ISS:UniProtKB; .
GOGO:0004647; F:phosphoserine phosphatase activity; ISS:UniProtKB; .
GOGO:0006564; P:L-serine biosynthetic process; IBA:RefGenome; .
GOGO:0009612; P:response to mechanical stimulus; IEP:RGD; .
GOGO:0031667; P:response to nutrient levels; IEP:RGD; .
GOGO:0033574; P:response to testosterone stimulus; IEP:RGD; .
InterProIPR005834; Dehalogen-like_hydro; .
InterProIPR023214; HAD-like_dom; .
InterProIPR006383; HAD-SF_hydro_IB_PSP-like; .
InterProIPR023190; Pser_Pase_dom_2; .
InterProIPR004469; SerB; .
Gene3DG3DSA:; HAD-like_dom; 2; .
Gene3DG3DSA:; Pser_Pase_dom_2; 1; .
KOK01079; -; .
PfamPF00702; Hydrolase; 1; .
SUPFAMSSF56784; HAD-like_dom; 1; .
TIGRFAMsTIGR00338; SerB; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server