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World-2DPAGE Repository
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0014]' for entry
matching:
SYDC_RAT
World-2DPAGE Repository
(0014):
SYDC_RAT
SYDC_RAT
General information about the entry
View entry in simple text format
Entry name
SYDC_RAT
Primary accession number
P15178
integrated into World-2DPAGE Repository (0014) on
October 13, 2008 (release 1)
2D Annotations were last modified on
June 1, 2011 (version 3)
General Annotations were last modified on
November 25, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; EC=6.1.1.12; AltName: Full=Aspartate--tRNA ligase; Short=AspRS;.
Gene name
Name=Dars
Synonyms=Drs1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.200900680
;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein
RAT_CEREBELLUM_21D
{Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
map experimental info
RAT_CEREBELLUM_21D
MAP LOCATIONS:
SPOT 3376
:
pI=6.28; Mw=57000
[identification data]
IDENTIFICATION:
SPOT 3376: SeqCov=37%. MascotPMF=152 [
1
].
MAPPING (identification):
SPOT
3376
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE
10017.
UniProtKB/Swiss-Prot
P15178; SYDC_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
SYDC_RAT
Primary accession number
P15178
Sequence was last modified on
April 1, 1990 (version 1)
Annotations were last modified on
November 16, 2011 (version 97)
Name and origin of the protein
Description
RecName: Full=Aspartyl-tRNA synthetase, cytoplasmic; EC=6.1.1.12; AltName: Full=Aspartate--tRNA ligase; Short=AspRS;
Gene name
Name=Dars
Synonyms=Drs1
Encoded on
Name=Dars; Synonyms=Drs1
Keywords
Acetylation
;
Aminoacyl-tRNA synthetase
;
ATP-binding
;
Complete proteome
;
Cytoplasm
;
Ligase
;
Nucleotide-binding
;
Phosphoprotein
;
Protein biosynthesis
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
J04487; AAA40789.1
; -; mRNA
EMBL
U30812; AAC52981.1
; -; Genomic_DNA
EMBL
U30485; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30800; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30801; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30802; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30803; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30804; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30805; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30806; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30807; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30808; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30809; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30810; AAC52981.1
; JOINED; Genomic_DNA
EMBL
U30811; AAC52981.1
; JOINED; Genomic_DNA
EMBL
BC072534; AAH72534.1
; -; mRNA
IPI
IPI00206224; -
; .
PIR
A32197; SYRTDT
; .
RefSeq
NP_446251.1; NM_053799.2
; .
UniGene
Rn.2388; -
; .
ProteinModelPortal
P15178; -
; .
SMR
P15178; 22-501
; .
IntAct
P15178; 1
; .
STRING
P15178; -
; .
PRIDE
P15178; -
; .
Ensembl
ENSRNOT00000005127; ENSRNOP00000005127
; ENSRNOG00000003743; .
GeneID
116483; -
; .
KEGG
rno:116483; -
; .
NMPDR
fig|10116.3.peg.9015; -
; .
UCSC
BC072534; rat
; .
CTD
1615; -
; .
RGD
621167; Dars
; .
eggNOG
roNOG09672; -
; .
GeneTree
ENSGT00550000074880; -
; .
HOVERGEN
HBG001028; -
; .
InParanoid
P15178; -
; .
OMA
RNPKQSN; -
; .
OrthoDB
EOG470TH2; -
; .
PhylomeDB
P15178; -
; .
NextBio
619059; -
; .
ArrayExpress
P15178; -
; .
Genevestigator
P15178; -
; .
GermOnline
ENSRNOG00000003743; Rattus norvegicus
; .
GO
GO:0017101; C:aminoacyl-tRNA synthetase multienzyme complex
; TAS:RGD; .
GO
GO:0005737; C:cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0004815; F:aspartate-tRNA ligase activity
; IEA:EC; .
GO
GO:0005524; F:ATP binding
; IEA:UniProtKB-KW; .
GO
GO:0003676; F:nucleic acid binding
; IEA:InterPro; .
GO
GO:0006422; P:aspartyl-tRNA aminoacylation
; IEA:InterPro; .
InterPro
IPR004364; aa-tRNA-synt_II
; .
InterPro
IPR018150; aa-tRNA-synt_II-like
; .
InterPro
IPR006195; aa-tRNA-synth_II
; .
InterPro
IPR004523; Asp-tRNA-synth_IIb_arc/euk
; .
InterPro
IPR002312; Asp/Asn-tRNA-synth_IIb
; .
InterPro
IPR012340; NA-bd_OB-fold
; .
InterPro
IPR016027; NA-bd_OB-fold-like
; .
InterPro
IPR004365; NA-bd_OB_tRNA-helicase
; .
Gene3D
G3DSA:2.40.50.140; OB_NA_bd_sub
; 1; .
KO
K01876; -
; .
PANTHER
PTHR22594; aa-tRNA-synt_II
; 1; .
PANTHER
PTHR22594:SF10; PTHR22594:SF10
; 1; .
Pfam
PF00152; tRNA-synt_2
; 1; .
Pfam
PF01336; tRNA_anti
; 1; .
PRINTS
PR01042; TRNASYNTHASP
; .
SUPFAM
SSF50249; Nucleic_acid_OB
; 1; .
TIGRFAMs
TIGR00458; AspS_arch
; 1; .
PROSITE
PS50862; AA_TRNA_LIGASE_II
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
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, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
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of the
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