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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0022]' for entry matching: TBB2C_RAT World-2DPAGE Repository (0022):  TBB2C_RAT TBB2C_RAT General information about the entry View entry in simple text format Entry name TBB2C_RAT Primary accession number Q6P9T8 integrated into World-2DPAGE Repository (0022) on  May 7, 2010 (release 1) 2D Annotations were last modified on June 22, 2011 (version 2) General Annotations were last modified on  November 24, 2011 (version 2) Name and origin of the protein Description RecName: Full=Tubulin beta-2C chain;. Gene name Name=Tubb2c Annotated species Rattus [TaxID: 10114] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000593; Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L. ''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity'' Proteomics 11(16):3369-3379 (2011) 2D PAGE maps for identified proteins How to interpret a protein HCR_LCR_HEART {HCR LCR Cardiac Map} Rattus Tissue: Heart   map experimental info   HCR_LCR_HEART MAP LOCATIONS: SPOT 340: pI=4.79; Mw=50225   [identification data] SPOT 828: pI=4.79; Mw=50225   [identification data] SPOT 932: pI=4.79; Mw=50225   [identification data] IDENTIFICATION: SPOT 340: SeqCov=31%. Peptides MS=13/20. Mascot PMF Score=109 [1] SPOT 828: SeqCov=15.1%. Peptides MS=15/20. Mascot PMF Score=32 [1]; SPOT 932: SeqCov=36.2%. Peptides MS=16/20. Mascot PMF Score=148 [1]. PEPTIDE EVIDENCE: SPOT 340: 310-YLTVAAVFR-318 (55) / 242-FPGQLNADLR-251 (42) / 104-GHYTEGAELVDSVLDVVR-121 (89) [1] SPOT 828: 310-YLTVAAVFR-318 (43) / 242-FPGQLNADLR-251 (35) / 381-ISEQFTAMFR-390 (32) [1]. MAPPING (identification): SPOT 340: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 828: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]; SPOT 932: Peptide mass fingerprinting [1]. Copyright Data from Dr. Jatin Burniston, Liverpool John Moores University, UK Cross-references UniProtKB/Swiss-Prot Q6P9T8; TBB2C_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_11 Entry name TBB2C_RAT Primary accession number Q6P9T8 Sequence was last modified on  July 5, 2004 (version 1) Annotations were last modified on  November 16, 2011 (version 63) Name and origin of the protein Description RecName: Full=Tubulin beta-2C chain; Gene name Name=Tubb2c Encoded on Name=Tubb2c Keywords Acetylation; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; GTP-binding; Microtubule; Nucleotide-binding; Phosphoprotein; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL BC060597; AAH60597.1; -; mRNA IPI IPI00400573; -; . RefSeq NP_954525.1; NM_199094.1; . UniGene Rn.110562; -; . HSSP P02554; 1SA1; . ProteinModelPortal Q6P9T8; -; . SMR Q6P9T8; 1-427; . IntAct Q6P9T8; 2; . STRING Q6P9T8; -; . PhosphoSite Q6P9T8; -; . PRIDE Q6P9T8; -; . GeneID 296554; -; . KEGG rno:296554; -; . UCSC NM_199094; rat; . CTD 10383; -; . RGD 735101; Tubb2c; . eggNOG roNOG14625; -; . GeneTree ENSGT00600000084215; -; . HOVERGEN HBG000089; -; . InParanoid Q6P9T8; -; . OrthoDB EOG4DFPNJ; -; . PhylomeDB Q6P9T8; -; . Reactome REACT_115492; Developmental Biology; . NextBio 641372; -; . ArrayExpress Q6P9T8; -; . Genevestigator Q6P9T8; -; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-KW; . GO GO:0005874; C:microtubule; IEA:UniProtKB-KW; . GO GO:0005525; F:GTP binding; IEA:UniProtKB-KW; . GO GO:0003924; F:GTPase activity; IEA:InterPro; . GO GO:0005198; F:structural molecule activity; IEA:InterPro; . GO GO:0007018; P:microtubule-based movement; IEA:InterPro; . GO GO:0051258; P:protein polymerization; IEA:InterPro; . InterPro IPR013838; Beta-tubulin_BS; . InterPro IPR002453; Beta_tubulin; . InterPro IPR008280; Tub_FtsZ_C; . InterPro IPR000217; Tubulin; . InterPro IPR018316; Tubulin/FtsZ_2-layer-sand-dom; . InterPro IPR023123; Tubulin_C; . InterPro IPR017975; Tubulin_CS; . InterPro IPR003008; Tubulin_FtsZ_GTPase; . Gene3D G3DSA:3.30.1330.20; Tubulin/FtsZ_2-layer-sand-dom; 1; . Gene3D G3DSA:1.10.287.600; Tubulin_C; 1; . Gene3D G3DSA:3.40.50.1440; Tubulin_FtsZ; 1; . KO K07375; -; . PANTHER PTHR11588; Tubulin; 1; . Pfam PF00091; Tubulin; 1; . Pfam PF03953; Tubulin_C; 1; . PRINTS PR01163; BETATUBULIN; . PRINTS PR01161; TUBULIN; . SMART SM00864; Tubulin; 1; . SMART SM00865; Tubulin_C; 1; . SUPFAM SSF55307; Tub_FtsZ_C; 1; . SUPFAM SSF52490; Tubulin_FtsZ; 1; . PROSITE PS00227; TUBULIN; 1; . PROSITE PS00228; TUBULIN_B_AUTOREG; 1; . World-2DPAGE Repository (search AC)