World-2DPAGE Home
Home  |  Contact

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 
Maps  [experimental info] 
[protein list] 
[graphical interface]
     Databases

use 'Ctrl' to select several
databases

Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0004]' for entry matching: TCPB_RAT




World-2DPAGE Repository (0004):  TCPB_RAT

TCPB_RAT


General information about the entry
View entry in simple text format
Entry nameTCPB_RAT
Primary accession numberQ5XIM9
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=T-complex protein 1 subunit beta; Short=TCP-1-beta; AltName: Full=CCT-beta;.
Gene nameName=Cct2
Synonyms=Cctb
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=5.95; Mw=52000  [identification data]

MAPPING (identification):
SPOT 329: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtQ5XIM9; TCPB_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameTCPB_RAT
Primary accession numberQ5XIM9
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on November 16, 2011 (version 63)
Name and origin of the protein
DescriptionRecName: Full=T-complex protein 1 subunit beta; Short=TCP-1-beta; AltName: Full=CCT-beta;
Gene nameName=Cct2
Synonyms=Cctb
Encoded onName=Cct2; Synonyms=Cctb
KeywordsAcetylation; ATP-binding; Chaperone; Complete proteome; Cytoplasm; Direct protein sequencing; Nucleotide-binding; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLBC083650; AAH83650.1; -; mRNA
IPIIPI00366218; -; .
RefSeqNP_001005905.1; NM_001005905.1; .
UniGeneRn.2392; -; .
HSSPP48424; 1A6D; .
ProteinModelPortalQ5XIM9; -; .
IntActQ5XIM9; 1; .
MINTMINT-4577122; -; .
STRINGQ5XIM9; -; .
World-2DPAGE0004:Q5XIM9; -; .
PRIDEQ5XIM9; -; .
EnsemblENSRNOT00000037946; ENSRNOP00000029234; ENSRNOG00000021317; .
GeneID299809; -; .
KEGGrno:299809; -; .
NMPDRfig|10116.3.peg.26795; -; .
UCSCNM_001005905; rat; .
CTD10576; -; .
RGD1359143; Cct2; .
eggNOGroNOG13420; -; .
GeneTreeENSGT00550000074930; -; .
HOVERGENHBG001052; -; .
InParanoidQ5XIM9; -; .
OrthoDBEOG47WNNK; -; .
PhylomeDBQ5XIM9; -; .
NextBio645802; -; .
ArrayExpressQ5XIM9; -; .
GenevestigatorQ5XIM9; -; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0051082; F:unfolded protein binding; IEA:InterPro; .
GOGO:0006457; P:protein folding; IEA:InterPro; .
InterProIPR012716; Chap_CCT_beta; .
InterProIPR017998; Chaperone_TCP-1; .
InterProIPR002194; Chaperonin_TCP-1_CS; .
InterProIPR002423; Cpn60/TCP-1; .
KOK09494; -; .
PANTHERPTHR11353:SF23; Chap_CCT_beta; 1; .
PANTHERPTHR11353; Cpn60/TCP-1; 1; .
PfamPF00118; Cpn60_TCP1; 1; .
PRINTSPR00304; TCOMPLEXTCP1; .
SUPFAMSSF48592; GroEL-ATPase; 1; .
TIGRFAMsTIGR02341; Chap_CCT_beta; 1; .
PROSITEPS00750; TCP1_1; 1; .
PROSITEPS00751; TCP1_2; 1; .
PROSITEPS00995; TCP1_3; 1; .


World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server