World-2DPAGE Repository

Entry name

TERA_RAT

Primary accession number

P46462

integrated into World-2DPAGE Repository (0004) on

October 13, 2008 (release 1)

2D Annotations were last modified on

May 18, 2011 (version 2)

General Annotations were last modified on

December 22, 2011 (version 2)

Name and origin of the protein

Description

RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;.

Gene name

Name=Vcp

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

OB21DSUB

MAP LOCATIONS:

SPOT 115:

pI=5.44; Mw=95000

MAPPING (identification):

SPOT 115: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	TERA_RAT
Primary accession number	P46462
Sequence was last modified on	January 23, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 111)
Name and origin of the protein
Description	RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;
Gene name	Name=Vcp
Encoded on	Name=Vcp
Keywords	Acetylation; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Lipid-binding; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Transport; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U11760; AAC52154.1; -; mRNA
EMBL	BC060518; AAH60518.1; -; mRNA
IPI	IPI00212014; -; .
PIR	A55190; A55190; .
RefSeq	NP_446316.1; NM_053864.2; .
UniGene	Rn.98891; -; .
ProteinModelPortal	P46462; -; .
SMR	P46462; 18-763; .
IntAct	P46462; 3; .
MINT	MINT-1954391; -; .
STRING	P46462; -; .
PhosphoSite	P46462; -; .
World-2DPAGE	0004:P46462; -; .
PRIDE	P46462; -; .
Ensembl	ENSRNOT00000046102; ENSRNOP00000040121; ENSRNOG00000034242; .
GeneID	116643; -; .
KEGG	rno:116643; -; .
UCSC	NM_053864; rat; .
CTD	7415; -; .
RGD	621595; Vcp; .
eggNOG	roNOG06583; -; .
GeneTree	ENSGT00600000084477; -; .
HOVERGEN	HBG001226; -; .
InParanoid	P46462; -; .
OrthoDB	EOG45TCMK; -; .
PhylomeDB	P46462; -; .
NextBio	619375; -; .
ArrayExpress	P46462; -; .
Genevestigator	P46462; -; .
GermOnline	ENSRNOG00000034242; Rattus norvegicus; .
GO	GO:0005829; C:cytosol; IDA:RGD; .
GO	GO:0005783; C:endoplasmic reticulum; IDA:RGD; .
GO	GO:0005792; C:microsome; IDA:RGD; .
GO	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GO	GO:0005524; F:ATP binding; IDA:BHF-UCL; .
GO	GO:0016887; F:ATPase activity; IDA:RGD; .
GO	GO:0042802; F:identical protein binding; IDA:BHF-UCL; .
GO	GO:0008289; F:lipid binding; IEA:UniProtKB-KW; .
GO	GO:0005102; F:receptor binding; IDA:RGD; .
GO	GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:RGD; .
GO	GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:RGD; .
GO	GO:0051260; P:protein homooligomerization; IDA:RGD; .
InterPro	IPR009010; Asp_de-COase-like_fold; .
InterPro	IPR003593; ATPase_AAA+_core; .
InterPro	IPR005938; ATPase_AAA_CDC48; .
InterPro	IPR003959; ATPase_AAA_core; .
InterPro	IPR003960; ATPase_AAA_CS; .
InterPro	IPR003338; ATPase_AAA_VAT_N; .
InterPro	IPR004201; Cell_div_Cdc48_dom2; .
InterPro	IPR015415; Vps4_C; .
Gene3D	G3DSA:2.40.40.20; Asp_decarboxylase-like_fold; 1; .
KO	K13525; -; .
PANTHER	PTHR23077:SF18; PTHR23077:SF18; 1; .
Pfam	PF00004; AAA; 2; .
Pfam	PF02933; CDC48_2; 1; .
Pfam	PF02359; CDC48_N; 1; .
Pfam	PF09336; Vps4_C; 1; .
SMART	SM00382; AAA; 2; .
SUPFAM	SSF50692; Asp_decarb_fold; 1; .
TIGRFAMs	TIGR01243; CDC48; 1; .
PROSITE	PS00674; AAA; 2; .

Searching in 'World-2DPAGE Repository [0014]' for entry matching: TERA_RAT

World-2DPAGE Repository (0014): TERA_RAT

TERA_RAT

General information about the entry

Entry name

TERA_RAT

Primary accession number

P46462

integrated into World-2DPAGE Repository (0014) on

October 13, 2008 (release 1)

2D Annotations were last modified on

June 1, 2011 (version 3)

General Annotations were last modified on

November 25, 2011 (version 2)

Name and origin of the protein

Description

RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;.

Gene name

Name=Vcp

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.200900680; Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of whole cerebellum of the mature rat'' Proteomics 10(23):4311-4319 (2010)

2D PAGE maps for identified proteins

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum

RAT_CEREBELLUM_21D

MAP LOCATIONS:

SPOT 2713:

pI=5.33; Mw=79000

IDENTIFICATION: SPOT 2713: SeqCov=47%. MascotPMF=238 [1].
MAPPING (identification):

SPOT 2713: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

PRIDE

10017.

UniProtKB/Swiss-Prot

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry name	TERA_RAT
Primary accession number	P46462
Sequence was last modified on	January 23, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 111)
Name and origin of the protein
Description	RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;
Gene name	Name=Vcp
Encoded on	Name=Vcp
Keywords	Acetylation; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Lipid-binding; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Transport; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U11760; AAC52154.1; -; mRNA
EMBL	BC060518; AAH60518.1; -; mRNA
IPI	IPI00212014; -; .
PIR	A55190; A55190; .
RefSeq	NP_446316.1; NM_053864.2; .
UniGene	Rn.98891; -; .
ProteinModelPortal	P46462; -; .
SMR	P46462; 18-763; .
IntAct	P46462; 3; .
MINT	MINT-1954391; -; .
STRING	P46462; -; .
PhosphoSite	P46462; -; .
World-2DPAGE	0004:P46462; -; .
PRIDE	P46462; -; .
Ensembl	ENSRNOT00000046102; ENSRNOP00000040121; ENSRNOG00000034242; .
GeneID	116643; -; .
KEGG	rno:116643; -; .
UCSC	NM_053864; rat; .
CTD	7415; -; .
RGD	621595; Vcp; .
eggNOG	roNOG06583; -; .
GeneTree	ENSGT00600000084477; -; .
HOVERGEN	HBG001226; -; .
InParanoid	P46462; -; .
OrthoDB	EOG45TCMK; -; .
PhylomeDB	P46462; -; .
NextBio	619375; -; .
ArrayExpress	P46462; -; .
Genevestigator	P46462; -; .
GermOnline	ENSRNOG00000034242; Rattus norvegicus; .
GO	GO:0005829; C:cytosol; IDA:RGD; .
GO	GO:0005783; C:endoplasmic reticulum; IDA:RGD; .
GO	GO:0005792; C:microsome; IDA:RGD; .
GO	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GO	GO:0005524; F:ATP binding; IDA:BHF-UCL; .
GO	GO:0016887; F:ATPase activity; IDA:RGD; .
GO	GO:0042802; F:identical protein binding; IDA:BHF-UCL; .
GO	GO:0008289; F:lipid binding; IEA:UniProtKB-KW; .
GO	GO:0005102; F:receptor binding; IDA:RGD; .
GO	GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:RGD; .
GO	GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:RGD; .
GO	GO:0051260; P:protein homooligomerization; IDA:RGD; .
InterPro	IPR009010; Asp_de-COase-like_fold; .
InterPro	IPR003593; ATPase_AAA+_core; .
InterPro	IPR005938; ATPase_AAA_CDC48; .
InterPro	IPR003959; ATPase_AAA_core; .
InterPro	IPR003960; ATPase_AAA_CS; .
InterPro	IPR003338; ATPase_AAA_VAT_N; .
InterPro	IPR004201; Cell_div_Cdc48_dom2; .
InterPro	IPR015415; Vps4_C; .
Gene3D	G3DSA:2.40.40.20; Asp_decarboxylase-like_fold; 1; .
KO	K13525; -; .
PANTHER	PTHR23077:SF18; PTHR23077:SF18; 1; .
Pfam	PF00004; AAA; 2; .
Pfam	PF02933; CDC48_2; 1; .
Pfam	PF02359; CDC48_N; 1; .
Pfam	PF09336; Vps4_C; 1; .
SMART	SM00382; AAA; 2; .
SUPFAM	SSF50692; Asp_decarb_fold; 1; .
TIGRFAMs	TIGR01243; CDC48; 1; .
PROSITE	PS00674; AAA; 2; .

Searching in 'World-2DPAGE Repository [0019]' for entry matching: TERA_RAT

World-2DPAGE Repository (0019): TERA_RAT

TERA_RAT

General information about the entry

Entry name

TERA_RAT

Primary accession number

P46462

integrated into World-2DPAGE Repository (0019) on

December 9, 2009 (release 1)

2D Annotations were last modified on

May 30, 2011 (version 2)

General Annotations were last modified on

January 13, 2012 (version 2)

Name and origin of the protein

Description

RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;.

Gene name

Name=Vcp

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1111/j.1471-4159.2010.06719.x; VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M. ''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome'' J of Neurochemistry 113(6):1577-1588 (2010)

2D PAGE maps for identified proteins

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus

HIPP_SYNAP

MAP LOCATIONS:

SPOT 1129:

pI=5.14; Mw=89977

IDENTIFICATION: SPOT 1129: Peptides number=11. SeqCov=19.4%. MOWSE score=1.87E+6 [1].
MAPPING (identification):

SPOT 1129: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Willard Freeman, Penn State College of Medicine, USA

Cross-references

UniProtKB/Swiss-Prot

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	TERA_RAT
Primary accession number	P46462
Sequence was last modified on	January 23, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 111)
Name and origin of the protein
Description	RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;
Gene name	Name=Vcp
Encoded on	Name=Vcp
Keywords	Acetylation; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Lipid-binding; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Transport; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U11760; AAC52154.1; -; mRNA
EMBL	BC060518; AAH60518.1; -; mRNA
IPI	IPI00212014; -; .
PIR	A55190; A55190; .
RefSeq	NP_446316.1; NM_053864.2; .
UniGene	Rn.98891; -; .
ProteinModelPortal	P46462; -; .
SMR	P46462; 18-763; .
IntAct	P46462; 3; .
MINT	MINT-1954391; -; .
STRING	P46462; -; .
PhosphoSite	P46462; -; .
World-2DPAGE	0004:P46462; -; .
PRIDE	P46462; -; .
Ensembl	ENSRNOT00000046102; ENSRNOP00000040121; ENSRNOG00000034242; .
GeneID	116643; -; .
KEGG	rno:116643; -; .
UCSC	NM_053864; rat; .
CTD	7415; -; .
RGD	621595; Vcp; .
eggNOG	roNOG06583; -; .
GeneTree	ENSGT00600000084477; -; .
HOVERGEN	HBG001226; -; .
InParanoid	P46462; -; .
OrthoDB	EOG45TCMK; -; .
PhylomeDB	P46462; -; .
NextBio	619375; -; .
ArrayExpress	P46462; -; .
Genevestigator	P46462; -; .
GermOnline	ENSRNOG00000034242; Rattus norvegicus; .
GO	GO:0005829; C:cytosol; IDA:RGD; .
GO	GO:0005783; C:endoplasmic reticulum; IDA:RGD; .
GO	GO:0005792; C:microsome; IDA:RGD; .
GO	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GO	GO:0005524; F:ATP binding; IDA:BHF-UCL; .
GO	GO:0016887; F:ATPase activity; IDA:RGD; .
GO	GO:0042802; F:identical protein binding; IDA:BHF-UCL; .
GO	GO:0008289; F:lipid binding; IEA:UniProtKB-KW; .
GO	GO:0005102; F:receptor binding; IDA:RGD; .
GO	GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:RGD; .
GO	GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:RGD; .
GO	GO:0051260; P:protein homooligomerization; IDA:RGD; .
InterPro	IPR009010; Asp_de-COase-like_fold; .
InterPro	IPR003593; ATPase_AAA+_core; .
InterPro	IPR005938; ATPase_AAA_CDC48; .
InterPro	IPR003959; ATPase_AAA_core; .
InterPro	IPR003960; ATPase_AAA_CS; .
InterPro	IPR003338; ATPase_AAA_VAT_N; .
InterPro	IPR004201; Cell_div_Cdc48_dom2; .
InterPro	IPR015415; Vps4_C; .
Gene3D	G3DSA:2.40.40.20; Asp_decarboxylase-like_fold; 1; .
KO	K13525; -; .
PANTHER	PTHR23077:SF18; PTHR23077:SF18; 1; .
Pfam	PF00004; AAA; 2; .
Pfam	PF02933; CDC48_2; 1; .
Pfam	PF02359; CDC48_N; 1; .
Pfam	PF09336; Vps4_C; 1; .
SMART	SM00382; AAA; 2; .
SUPFAM	SSF50692; Asp_decarb_fold; 1; .
TIGRFAMs	TIGR01243; CDC48; 1; .
PROSITE	PS00674; AAA; 2; .

Searching in 'World-2DPAGE Repository [0022]' for entry matching: TERA_RAT

World-2DPAGE Repository (0022): TERA_RAT

TERA_RAT

General information about the entry

Entry name

TERA_RAT

Primary accession number

P46462

integrated into World-2DPAGE Repository (0022) on

May 7, 2010 (release 1)

2D Annotations were last modified on

June 22, 2011 (version 2)

General Annotations were last modified on

November 24, 2011 (version 2)

Name and origin of the protein

Description

RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;.

Gene name

Name=Vcp

Annotated species

Rattus [TaxID: 10114]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.

References

[1]

2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)

2D PAGE maps for identified proteins

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart

HCR_LCR_HEART

MAP LOCATIONS:

SPOT 654:

pI=5.14; Mw=89977

IDENTIFICATION: SPOT 654: SeqCov=12.5%. Peptides MS=10/20. Mascot PMF Score=47 [1].
PEPTIDE EVIDENCE: SPOT 654: 232-AIGVKPPR-239 (12) / 454-WALSQSNPSALR-465 (73) / 754-KYEMFAQTLQQSR-766 (73) [1].
MAPPING (identification):

SPOT 654: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Jatin Burniston, Liverpool John Moores University, UK

Cross-references

UniProtKB/Swiss-Prot

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry name	TERA_RAT
Primary accession number	P46462
Sequence was last modified on	January 23, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 111)
Name and origin of the protein
Description	RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;
Gene name	Name=Vcp
Encoded on	Name=Vcp
Keywords	Acetylation; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Hydrolase; Lipid-binding; Nucleotide-binding; Nucleus; Phosphoprotein; Reference proteome; Transport; Ubl conjugation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	U11760; AAC52154.1; -; mRNA
EMBL	BC060518; AAH60518.1; -; mRNA
IPI	IPI00212014; -; .
PIR	A55190; A55190; .
RefSeq	NP_446316.1; NM_053864.2; .
UniGene	Rn.98891; -; .
ProteinModelPortal	P46462; -; .
SMR	P46462; 18-763; .
IntAct	P46462; 3; .
MINT	MINT-1954391; -; .
STRING	P46462; -; .
PhosphoSite	P46462; -; .
World-2DPAGE	0004:P46462; -; .
PRIDE	P46462; -; .
Ensembl	ENSRNOT00000046102; ENSRNOP00000040121; ENSRNOG00000034242; .
GeneID	116643; -; .
KEGG	rno:116643; -; .
UCSC	NM_053864; rat; .
CTD	7415; -; .
RGD	621595; Vcp; .
eggNOG	roNOG06583; -; .
GeneTree	ENSGT00600000084477; -; .
HOVERGEN	HBG001226; -; .
InParanoid	P46462; -; .
OrthoDB	EOG45TCMK; -; .
PhylomeDB	P46462; -; .
NextBio	619375; -; .
ArrayExpress	P46462; -; .
Genevestigator	P46462; -; .
GermOnline	ENSRNOG00000034242; Rattus norvegicus; .
GO	GO:0005829; C:cytosol; IDA:RGD; .
GO	GO:0005783; C:endoplasmic reticulum; IDA:RGD; .
GO	GO:0005792; C:microsome; IDA:RGD; .
GO	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell; .
GO	GO:0005524; F:ATP binding; IDA:BHF-UCL; .
GO	GO:0016887; F:ATPase activity; IDA:RGD; .
GO	GO:0042802; F:identical protein binding; IDA:BHF-UCL; .
GO	GO:0008289; F:lipid binding; IEA:UniProtKB-KW; .
GO	GO:0005102; F:receptor binding; IDA:RGD; .
GO	GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:RGD; .
GO	GO:0032436; P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:RGD; .
GO	GO:0051260; P:protein homooligomerization; IDA:RGD; .
InterPro	IPR009010; Asp_de-COase-like_fold; .
InterPro	IPR003593; ATPase_AAA+_core; .
InterPro	IPR005938; ATPase_AAA_CDC48; .
InterPro	IPR003959; ATPase_AAA_core; .
InterPro	IPR003960; ATPase_AAA_CS; .
InterPro	IPR003338; ATPase_AAA_VAT_N; .
InterPro	IPR004201; Cell_div_Cdc48_dom2; .
InterPro	IPR015415; Vps4_C; .
Gene3D	G3DSA:2.40.40.20; Asp_decarboxylase-like_fold; 1; .
KO	K13525; -; .
PANTHER	PTHR23077:SF18; PTHR23077:SF18; 1; .
Pfam	PF00004; AAA; 2; .
Pfam	PF02933; CDC48_2; 1; .
Pfam	PF02359; CDC48_N; 1; .
Pfam	PF09336; Vps4_C; 1; .
SMART	SM00382; AAA; 2; .
SUPFAM	SSF50692; Asp_decarb_fold; 1; .
TIGRFAMs	TIGR01243; CDC48; 1; .
PROSITE	PS00674; AAA; 2; .

Searching in 'World-2DPAGE Repository [0030]' for entry matching: TERA_RAT

World-2DPAGE Repository (0030): TERA_RAT

TERA_RAT

General information about the entry

Entry name

TERA_RAT

Primary accession number

P46462

integrated into World-2DPAGE Repository (0030) on

November 9, 2010 (release 1)

2D Annotations were last modified on

June 21, 2011 (version 2)

General Annotations were last modified on

November 23, 2011 (version 2)

Name and origin of the protein

Description

RecName: Full=Transitional endoplasmic reticulum ATPase; Short=TER ATPase; AltName: Full=15S Mg(2+)-ATPase p97 subunit; AltName: Full=Valosin-containing protein; Short=VCP;.

Gene name

Name=Vcp

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	2D-PAGE GEL CHARACTERIZATION DOI=10.1002/pmic.201000006; D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C. ''Two-dimensional gel proteome reference map of INS-1E cells'' Proteomics 11(7):1365-1369 (2011)

2D PAGE maps for identified proteins

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)

RAT_INS1E_4-7

MAP LOCATIONS:

SPOT 310:

pI=5.11; Mw=91837

SPOT 311:

pI=5.18; Mw=91710

SPOT 319:

pI=5.15; Mw=91078

SPOT 1082:

pI=4.65; Mw=59976

IDENTIFICATION: SPOT 310: Mascot protein score=371. Number of peptides=9 [1]
SPOT 311: Mascot protein score=74. Number of peptides=2 [1]; SPOT 319: Mascot protein score=375. Number of peptides=8 [1]; SPOT 1082: Mascot protein score=756. Number of peptides=9 [1].
MAPPING (identification):

SPOT 310: Tandem mass spectrometry [1];
SPOT 311: Tandem mass spectrometry [1];
SPOT 319: Tandem mass spectrometry [1];
SPOT 1082: Tandem mass spectrometry [1].

Copyright

Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium

Cross-references

UniProtKB/Swiss-Prot

World-2DPAGE Repository