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Searching in 'World-2DPAGE Repository [0022]' for entry matching: TNNI3_RAT




World-2DPAGE Repository (0022):  TNNI3_RAT

TNNI3_RAT


General information about the entry
View entry in simple text format
Entry nameTNNI3_RAT
Primary accession numberP23693
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Troponin I, cardiac muscle; AltName: Full=Cardiac troponin I;.
Gene nameName=Tnni3
Synonyms=Ctni, Tni
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=9.57; Mw=24259  [identification data]
pI=9.57; Mw=24259  [identification data]
pI=9.57; Mw=24259  [identification data]

IDENTIFICATION: SPOT 339: SeqCov=34.6%. Peptides MS=9/20. Mascot PMF Score=53 [1]
SPOT 678: SeqCov=26.5%. Peptides MS=6/20. Mascot PMF Score=38 [1]; SPOT 955: SeqCov=36%. Peptides MS=10/20. Mascot PMF Score=72 [1].
PEPTIDE EVIDENCE: SPOT 339: 188-EVGDWR-193 (26) / 140-FKRPTLR-146 (17) / 29-AYATEPHAK-37 (52) [1]
SPOT 678: 81-CQPLVLDGLGFEELQDLCR-99 (49) [1]; SPOT 955: 188-EVGDWR-193 (25) / 140-FKRPTLR-146 (14) / 81-CQPLVLDGLGFEELQDLCR-99 (41) [1].
MAPPING (identification):
SPOT 339: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 678: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 955: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP23693; TNNI3_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameTNNI3_RAT
Primary accession numberP23693
Secondary accession number(s) Q4PP23
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 75)
Name and origin of the protein
DescriptionRecName: Full=Troponin I, cardiac muscle; AltName: Full=Cardiac troponin I;
Gene nameName=Tnni3
Synonyms=Ctni, Tni
Encoded onName=Tnni3; Synonyms=Ctni, Tni
KeywordsAcetylation; Actin-binding; Complete proteome; Muscle protein; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM57679; AAA63504.1; -; mRNA
EMBLX58499; CAA41402.1; -; mRNA
EMBLM92074; AAA42294.1; -; mRNA
EMBLU77354; AAB52234.1; -; Genomic_DNA
EMBLDQ062462; AAY63993.1; -; mRNA
IPIIPI00231689; -; .
PIRA60124; A60124; .
PIRI56441; I56441; .
RefSeqNP_058840.1; NM_017144.1; .
UniGeneRn.64141; -; .
ProteinModelPortalP23693; -; .
SMRP23693; 1-32; 41-192; .
STRINGP23693; -; .
PhosphoSiteP23693; -; .
PRIDEP23693; -; .
EnsemblENSRNOT00000024640; ENSRNOP00000024640; ENSRNOG00000018250; .
GeneID29248; -; .
KEGGrno:29248; -; .
UCSCNM_017144; rat; .
CTD7137; -; .
RGD62052; Tnni3; .
eggNOGroNOG15771; -; .
GeneTreeENSGT00390000002746; -; .
HOVERGENHBG052737; -; .
InParanoidP23693; -; .
OMAVKKDVME; -; .
OrthoDBEOG4001KH; -; .
PhylomeDBP23693; -; .
NextBio608538; -; .
ArrayExpressP23693; -; .
GenevestigatorP23693; -; .
GermOnlineENSRNOG00000018250; Rattus norvegicus; .
GOGO:0005861; C:troponin complex; TAS:RGD; .
GOGO:0003779; F:actin binding; IEA:UniProtKB-KW; .
GOGO:0060048; P:cardiac muscle contraction; IDA:RGD; .
GOGO:0006940; P:regulation of smooth muscle contraction; IMP:RGD; .
InterProIPR001978; Troponin; .
InterProIPR021666; Troponin-I_N; .
KOK12044; -; .
PfamPF00992; Troponin; 1; .
PfamPF11636; Troponin-I_N; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server