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World-2DPAGE Repository
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
TNNI3_RAT
World-2DPAGE Repository
(0022):
TNNI3_RAT
TNNI3_RAT
General information about the entry
View entry in simple text format
Entry name
TNNI3_RAT
Primary accession number
P23693
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Troponin I, cardiac muscle; AltName: Full=Cardiac troponin I;.
Gene name
Name=Tnni3
Synonyms=Ctni, Tni
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 339
:
pI=9.57; Mw=24259
[identification data]
SPOT 678
:
pI=9.57; Mw=24259
[identification data]
SPOT 955
:
pI=9.57; Mw=24259
[identification data]
IDENTIFICATION:
SPOT 339: SeqCov=34.6%. Peptides MS=9/20. Mascot PMF Score=53 [
1
]
SPOT 678: SeqCov=26.5%. Peptides MS=6/20. Mascot PMF Score=38 [
1
]; SPOT 955: SeqCov=36%. Peptides MS=10/20. Mascot PMF Score=72 [
1
].
PEPTIDE EVIDENCE:
SPOT 339: 188-EVGDWR-193 (26) / 140-FKRPTLR-146 (17) / 29-AYATEPHAK-37 (52) [
1
]
SPOT 678: 81-CQPLVLDGLGFEELQDLCR-99 (49) [
1
]; SPOT 955: 188-EVGDWR-193 (25) / 140-FKRPTLR-146 (14) / 81-CQPLVLDGLGFEELQDLCR-99 (41) [
1
].
MAPPING (identification):
SPOT
339
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
678
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
955
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
P23693; TNNI3_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
TNNI3_RAT
Primary accession number
P23693
Secondary accession number(s)
Q4PP23
Sequence was last modified on
January 23, 2007 (version 2)
Annotations were last modified on
November 16, 2011 (version 75)
Name and origin of the protein
Description
RecName: Full=Troponin I, cardiac muscle; AltName: Full=Cardiac troponin I;
Gene name
Name=Tnni3
Synonyms=Ctni, Tni
Encoded on
Name=Tnni3; Synonyms=Ctni, Tni
Keywords
Acetylation
;
Actin-binding
;
Complete proteome
;
Muscle protein
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
M57679; AAA63504.1
; -; mRNA
EMBL
X58499; CAA41402.1
; -; mRNA
EMBL
M92074; AAA42294.1
; -; mRNA
EMBL
U77354; AAB52234.1
; -; Genomic_DNA
EMBL
DQ062462; AAY63993.1
; -; mRNA
IPI
IPI00231689; -
; .
PIR
A60124; A60124
; .
PIR
I56441; I56441
; .
RefSeq
NP_058840.1; NM_017144.1
; .
UniGene
Rn.64141; -
; .
ProteinModelPortal
P23693; -
; .
SMR
P23693; 1-32
; 41-192; .
STRING
P23693; -
; .
PhosphoSite
P23693; -
; .
PRIDE
P23693; -
; .
Ensembl
ENSRNOT00000024640; ENSRNOP00000024640
; ENSRNOG00000018250; .
GeneID
29248; -
; .
KEGG
rno:29248; -
; .
UCSC
NM_017144; rat
; .
CTD
7137; -
; .
RGD
62052; Tnni3
; .
eggNOG
roNOG15771; -
; .
GeneTree
ENSGT00390000002746; -
; .
HOVERGEN
HBG052737; -
; .
InParanoid
P23693; -
; .
OMA
VKKDVME; -
; .
OrthoDB
EOG4001KH; -
; .
PhylomeDB
P23693; -
; .
NextBio
608538; -
; .
ArrayExpress
P23693; -
; .
Genevestigator
P23693; -
; .
GermOnline
ENSRNOG00000018250; Rattus norvegicus
; .
GO
GO:0005861; C:troponin complex
; TAS:RGD; .
GO
GO:0003779; F:actin binding
; IEA:UniProtKB-KW; .
GO
GO:0060048; P:cardiac muscle contraction
; IDA:RGD; .
GO
GO:0006940; P:regulation of smooth muscle contraction
; IMP:RGD; .
InterPro
IPR001978; Troponin
; .
InterPro
IPR021666; Troponin-I_N
; .
KO
K12044; -
; .
Pfam
PF00992; Troponin
; 1; .
Pfam
PF11636; Troponin-I_N
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
ExPASy web server