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Searching in 'World-2DPAGE Repository [0004]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0004):  TPIS_RAT

TPIS_RAT


General information about the entry
View entry in simple text format
Entry nameTPIS_RAT
Primary accession numberP48500
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;.
Gene nameName=Tpi1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   MAPPING ON GEL
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
OB21DSUB
  map experimental info 		 
OB21DSUB

MAP LOCATIONS:
pI=6.67; Mw=26000  [identification data]

MAPPING (identification):
SPOT 633: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-ProtP48500; TPIS_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameTPIS_RAT
Primary accession numberP48500
Secondary accession number(s) A0JN18 Q6P793
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;
Gene nameName=Tpi1
Encoded onName=Tpi1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Gluconeogenesis; Glycolysis; Isomerase; Pentose shunt; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL36250; AAA42278.1; -; mRNA
EMBLBC061781; AAH61781.1; -; mRNA
EMBLBC126087; AAI26088.1; -; mRNA
IPIIPI00231767; -; .
RefSeqNP_075211.2; NM_022922.2; .
UniGeneRn.144555; -; .
UniGeneRn.37838; -; .
ProteinModelPortalP48500; -; .
SMRP48500; 3-249; .
IntActP48500; 2; .
STRINGP48500; -; .
PhosphoSiteP48500; -; .
Rat-heart-2DPAGEP48500; -; .
World-2DPAGE0004:P48500; -; .
PRIDEP48500; -; .
EnsemblENSRNOT00000020647; ENSRNOP00000020647; ENSRNOG00000015290; .
GeneID24849; -; .
KEGGrno:24849; -; .
NMPDRfig|10116.3.peg.22207; -; .
UCSCNM_022922; rat; .
CTD7167; -; .
RGD3896; Tpi1; .
eggNOGroNOG08237; -; .
HOVERGENHBG002599; -; .
InParanoidP48500; -; .
OMACPAIYLM; -; .
OrthoDBEOG40S0GF; -; .
PhylomeDBP48500; -; .
NextBio604616; -; .
ArrayExpressP48500; -; .
GenevestigatorP48500; -; .
GermOnlineENSRNOG00000015290; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0004807; F:triose-phosphate isomerase activity; IDA:RGD; .
GOGO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW; .
GOGO:0006096; P:glycolysis; TAS:RGD; .
GOGO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR022896; TrioseP_Isoase_bac/euk; .
InterProIPR000652; Triosephosphate_isomerase; .
InterProIPR020861; Triosephosphate_isomerase_AS; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
KOK01803; -; .
PANTHERPTHR21139; Triophos_ismrse; 1; .
PfamPF00121; TIM; 1; .
SUPFAMSSF51351; Triophos_ismrse; 1; .
TIGRFAMsTIGR00419; Tim; 1; .
PROSITEPS00171; TIM_1; 1; .
PROSITEPS51440; TIM_2; 1; .





Searching in 'World-2DPAGE Repository [0014]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0014):  TPIS_RAT

TPIS_RAT


General information about the entry
View entry in simple text format
Entry nameTPIS_RAT
Primary accession numberP48500
integrated into World-2DPAGE Repository (0014) on October 13, 2008 (release 1)
2D Annotations were last modified onJune 1, 2011 (version 3)
General Annotations were last modified on November 25, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;.
Gene nameName=Tpi1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.200900680;
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of whole cerebellum of the mature rat''
Proteomics 10(23):4311-4319 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_CEREBELLUM_21D {Proteome of 21 days old rat cerebellum}
Rattus norvegicus (Rat)
Tissue: Cerebellum
RAT_CEREBELLUM_21D
  map experimental info 		 
RAT_CEREBELLUM_21D

MAP LOCATIONS:
pI=6.69; Mw=27000  [identification data]

IDENTIFICATION: SPOT 3152: SeqCov=66%. MascotPMF=159 [1].
MAPPING (identification):
SPOT 3152: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
PRIDE10017.
UniProtKB/Swiss-ProtP48500; TPIS_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameTPIS_RAT
Primary accession numberP48500
Secondary accession number(s) A0JN18 Q6P793
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;
Gene nameName=Tpi1
Encoded onName=Tpi1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Gluconeogenesis; Glycolysis; Isomerase; Pentose shunt; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL36250; AAA42278.1; -; mRNA
EMBLBC061781; AAH61781.1; -; mRNA
EMBLBC126087; AAI26088.1; -; mRNA
IPIIPI00231767; -; .
RefSeqNP_075211.2; NM_022922.2; .
UniGeneRn.144555; -; .
UniGeneRn.37838; -; .
ProteinModelPortalP48500; -; .
SMRP48500; 3-249; .
IntActP48500; 2; .
STRINGP48500; -; .
PhosphoSiteP48500; -; .
Rat-heart-2DPAGEP48500; -; .
World-2DPAGE0004:P48500; -; .
PRIDEP48500; -; .
EnsemblENSRNOT00000020647; ENSRNOP00000020647; ENSRNOG00000015290; .
GeneID24849; -; .
KEGGrno:24849; -; .
NMPDRfig|10116.3.peg.22207; -; .
UCSCNM_022922; rat; .
CTD7167; -; .
RGD3896; Tpi1; .
eggNOGroNOG08237; -; .
HOVERGENHBG002599; -; .
InParanoidP48500; -; .
OMACPAIYLM; -; .
OrthoDBEOG40S0GF; -; .
PhylomeDBP48500; -; .
NextBio604616; -; .
ArrayExpressP48500; -; .
GenevestigatorP48500; -; .
GermOnlineENSRNOG00000015290; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0004807; F:triose-phosphate isomerase activity; IDA:RGD; .
GOGO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW; .
GOGO:0006096; P:glycolysis; TAS:RGD; .
GOGO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR022896; TrioseP_Isoase_bac/euk; .
InterProIPR000652; Triosephosphate_isomerase; .
InterProIPR020861; Triosephosphate_isomerase_AS; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
KOK01803; -; .
PANTHERPTHR21139; Triophos_ismrse; 1; .
PfamPF00121; TIM; 1; .
SUPFAMSSF51351; Triophos_ismrse; 1; .
TIGRFAMsTIGR00419; Tim; 1; .
PROSITEPS00171; TIM_1; 1; .
PROSITEPS51440; TIM_2; 1; .





Searching in 'World-2DPAGE Repository [0019]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0019):  TPIS_RAT

TPIS_RAT


General information about the entry
View entry in simple text format
Entry nameTPIS_RAT
Primary accession numberP48500
integrated into World-2DPAGE Repository (0019) on December 9, 2009 (release 1)
2D Annotations were last modified onMay 30, 2011 (version 2)
General Annotations were last modified on January 13, 2012 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;.
Gene nameName=Tpi1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1111/j.1471-4159.2010.06719.x;
VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M.
''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome''
J of Neurochemistry 113(6):1577-1588 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

HIPP_SYNAP {Rat hippocampal synaptoproteome}
Rattus norvegicus (Rat)
Tissue: Hippocampus
HIPP_SYNAP
  map experimental info 		 
HIPP_SYNAP

MAP LOCATIONS:
pI=7.07; Mw=27213  [identification data]
pI=6.45; Mw=27417  [identification data]
pI=7.07; Mw=27213  [identification data]
pI=6.45; Mw=27417  [identification data]
pI=6.45; Mw=27417  [identification data]
pI=6.45; Mw=27417  [identification data]

IDENTIFICATION: SPOT 767: Peptides number=2. SeqCov=8%. MOWSE score=2.09E+2 [1]
SPOT 768: Peptides number=7. SeqCov=45%. MOWSE score=1.26E+9 [1]; SPOT 770: Peptides number=4. SeqCov=20.9%. MOWSE score=2.99E+4 [1]; SPOT 771: Peptides number=7. SeqCov=35.7%. MOWSE score=4.28E+5 [1]; SPOT 782: Peptides number=7. SeqCov=38.6%. MOWSE score=1.76E+7 [1]; SPOT 1038: Peptides number=3. SeqCov=17.3%. MOWSE score=3.96E+2 [1].
MAPPING (identification):
SPOT 767: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 768: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 770: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 771: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 782: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 1038: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Willard Freeman, Penn State College of Medicine, USA
Cross-references
UniProtKB/Swiss-ProtP48500; TPIS_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameTPIS_RAT
Primary accession numberP48500
Secondary accession number(s) A0JN18 Q6P793
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;
Gene nameName=Tpi1
Encoded onName=Tpi1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Gluconeogenesis; Glycolysis; Isomerase; Pentose shunt; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL36250; AAA42278.1; -; mRNA
EMBLBC061781; AAH61781.1; -; mRNA
EMBLBC126087; AAI26088.1; -; mRNA
IPIIPI00231767; -; .
RefSeqNP_075211.2; NM_022922.2; .
UniGeneRn.144555; -; .
UniGeneRn.37838; -; .
ProteinModelPortalP48500; -; .
SMRP48500; 3-249; .
IntActP48500; 2; .
STRINGP48500; -; .
PhosphoSiteP48500; -; .
Rat-heart-2DPAGEP48500; -; .
World-2DPAGE0004:P48500; -; .
PRIDEP48500; -; .
EnsemblENSRNOT00000020647; ENSRNOP00000020647; ENSRNOG00000015290; .
GeneID24849; -; .
KEGGrno:24849; -; .
NMPDRfig|10116.3.peg.22207; -; .
UCSCNM_022922; rat; .
CTD7167; -; .
RGD3896; Tpi1; .
eggNOGroNOG08237; -; .
HOVERGENHBG002599; -; .
InParanoidP48500; -; .
OMACPAIYLM; -; .
OrthoDBEOG40S0GF; -; .
PhylomeDBP48500; -; .
NextBio604616; -; .
ArrayExpressP48500; -; .
GenevestigatorP48500; -; .
GermOnlineENSRNOG00000015290; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0004807; F:triose-phosphate isomerase activity; IDA:RGD; .
GOGO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW; .
GOGO:0006096; P:glycolysis; TAS:RGD; .
GOGO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR022896; TrioseP_Isoase_bac/euk; .
InterProIPR000652; Triosephosphate_isomerase; .
InterProIPR020861; Triosephosphate_isomerase_AS; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
KOK01803; -; .
PANTHERPTHR21139; Triophos_ismrse; 1; .
PfamPF00121; TIM; 1; .
SUPFAMSSF51351; Triophos_ismrse; 1; .
TIGRFAMsTIGR00419; Tim; 1; .
PROSITEPS00171; TIM_1; 1; .
PROSITEPS51440; TIM_2; 1; .





Searching in 'World-2DPAGE Repository [0022]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0022):  TPIS_RAT

TPIS_RAT


General information about the entry
View entry in simple text format
Entry nameTPIS_RAT
Primary accession numberP48500
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;.
Gene nameName=Tpi1
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=6.89; Mw=27345  [identification data]
pI=6.89; Mw=27345  [identification data]
pI=6.89; Mw=27345  [identification data]
pI=6.89; Mw=27345  [identification data]

IDENTIFICATION: SPOT 382: SeqCov=34.9%. Peptides MS=6/20. Mascot PMF Score=56 [1]
SPOT 422: SeqCov=43.8%. Peptides MS=10/20. Mascot PMF Score=113 [1]; SPOT 557: SeqCov=22.9%. Peptides MS=4/20. Mascot PMF Score=32 [1]; SPOT 868: SeqCov=33.3%. Peptides MS=7/20. Mascot PMF Score=67 [1].
PEPTIDE EVIDENCE: SPOT 382: 86-DLGATWVVLGHSER-99 (108) / 34-LPADTEVVCAPPTAYIDFAR-53 (117) [1]
SPOT 422: 7-FFVGGNWK-14 (62) / 86-DLGATWVVLGHSER-99 (94) / 34-LPADTEVVCAPPTAYIDFAR-53 (85) [1]; SPOT 557: 7-FFVGGNWK-14 (44) / 86-DLGATWVVLGHSER-99 (78) / 34-LPADTEVVCAPPTAYIDFAR-53 (85) [1]; SPOT 868: 7-FFVGGNWK-14 (59) / 86-DLGATWVVLGHSER-99 (96) / 34-LPADTEVVCAPPTAYIDFAR-53 (99) [1].
MAPPING (identification):
SPOT 382: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 422: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 557: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 868: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP48500; TPIS_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameTPIS_RAT
Primary accession numberP48500
Secondary accession number(s) A0JN18 Q6P793
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;
Gene nameName=Tpi1
Encoded onName=Tpi1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Gluconeogenesis; Glycolysis; Isomerase; Pentose shunt; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL36250; AAA42278.1; -; mRNA
EMBLBC061781; AAH61781.1; -; mRNA
EMBLBC126087; AAI26088.1; -; mRNA
IPIIPI00231767; -; .
RefSeqNP_075211.2; NM_022922.2; .
UniGeneRn.144555; -; .
UniGeneRn.37838; -; .
ProteinModelPortalP48500; -; .
SMRP48500; 3-249; .
IntActP48500; 2; .
STRINGP48500; -; .
PhosphoSiteP48500; -; .
Rat-heart-2DPAGEP48500; -; .
World-2DPAGE0004:P48500; -; .
PRIDEP48500; -; .
EnsemblENSRNOT00000020647; ENSRNOP00000020647; ENSRNOG00000015290; .
GeneID24849; -; .
KEGGrno:24849; -; .
NMPDRfig|10116.3.peg.22207; -; .
UCSCNM_022922; rat; .
CTD7167; -; .
RGD3896; Tpi1; .
eggNOGroNOG08237; -; .
HOVERGENHBG002599; -; .
InParanoidP48500; -; .
OMACPAIYLM; -; .
OrthoDBEOG40S0GF; -; .
PhylomeDBP48500; -; .
NextBio604616; -; .
ArrayExpressP48500; -; .
GenevestigatorP48500; -; .
GermOnlineENSRNOG00000015290; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0004807; F:triose-phosphate isomerase activity; IDA:RGD; .
GOGO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW; .
GOGO:0006096; P:glycolysis; TAS:RGD; .
GOGO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR022896; TrioseP_Isoase_bac/euk; .
InterProIPR000652; Triosephosphate_isomerase; .
InterProIPR020861; Triosephosphate_isomerase_AS; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
KOK01803; -; .
PANTHERPTHR21139; Triophos_ismrse; 1; .
PfamPF00121; TIM; 1; .
SUPFAMSSF51351; Triophos_ismrse; 1; .
TIGRFAMsTIGR00419; Tim; 1; .
PROSITEPS00171; TIM_1; 1; .
PROSITEPS51440; TIM_2; 1; .





Searching in 'World-2DPAGE Repository [0030]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0030):  TPIS_RAT

TPIS_RAT


General information about the entry
View entry in simple text format
Entry nameTPIS_RAT
Primary accession numberP48500
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;.
Gene nameName=Tpi1
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=6.56; Mw=26333  [identification data]

IDENTIFICATION: SPOT 2218: Mascot protein score=92. Number of peptides=3 [1].
MAPPING (identification):
SPOT 2218: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtP48500; TPIS_RAT.
World-2DPAGE RepositoryP48500; TPIS_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameTPIS_RAT
Primary accession numberP48500
Secondary accession number(s) A0JN18 Q6P793
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on November 16, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;
Gene nameName=Tpi1
Encoded onName=Tpi1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Gluconeogenesis; Glycolysis; Isomerase; Pentose shunt; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL36250; AAA42278.1; -; mRNA
EMBLBC061781; AAH61781.1; -; mRNA
EMBLBC126087; AAI26088.1; -; mRNA
IPIIPI00231767; -; .
RefSeqNP_075211.2; NM_022922.2; .
UniGeneRn.144555; -; .
UniGeneRn.37838; -; .
ProteinModelPortalP48500; -; .
SMRP48500; 3-249; .
IntActP48500; 2; .
STRINGP48500; -; .
PhosphoSiteP48500; -; .
Rat-heart-2DPAGEP48500; -; .
World-2DPAGE0004:P48500; -; .
PRIDEP48500; -; .
EnsemblENSRNOT00000020647; ENSRNOP00000020647; ENSRNOG00000015290; .
GeneID24849; -; .
KEGGrno:24849; -; .
NMPDRfig|10116.3.peg.22207; -; .
UCSCNM_022922; rat; .
CTD7167; -; .
RGD3896; Tpi1; .
eggNOGroNOG08237; -; .
HOVERGENHBG002599; -; .
InParanoidP48500; -; .
OMACPAIYLM; -; .
OrthoDBEOG40S0GF; -; .
PhylomeDBP48500; -; .
NextBio604616; -; .
ArrayExpressP48500; -; .
GenevestigatorP48500; -; .
GermOnlineENSRNOG00000015290; Rattus norvegicus; .
GOGO:0005829; C:cytosol; IDA:RGD; .
GOGO:0005634; C:nucleus; IDA:RGD; .
GOGO:0005625; C:soluble fraction; IDA:RGD; .
GOGO:0005515; F:protein binding; IPI:RGD; .
GOGO:0004807; F:triose-phosphate isomerase activity; IDA:RGD; .
GOGO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW; .
GOGO:0006096; P:glycolysis; TAS:RGD; .
GOGO:0006098; P:pentose-phosphate shunt; IEA:UniProtKB-KW; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR022896; TrioseP_Isoase_bac/euk; .
InterProIPR000652; Triosephosphate_isomerase; .
InterProIPR020861; Triosephosphate_isomerase_AS; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
KOK01803; -; .
PANTHERPTHR21139; Triophos_ismrse; 1; .
PfamPF00121; TIM; 1; .
SUPFAMSSF51351; Triophos_ismrse; 1; .
TIGRFAMsTIGR00419; Tim; 1; .
PROSITEPS00171; TIM_1; 1; .
PROSITEPS51440; TIM_2; 1; .





Searching in 'World-2DPAGE Repository [0069]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0069):  TPIS_RAT

TPIS_RAT


General information about the entry
View entry in simple text format
Entry nameTPIS_RAT
Primary accession numberTPIS_RAT
integrated into World-2DPAGE Repository (0069) on February 27, 2014 (release 1)
2D Annotations were last modified onFebruary 27, 2014 (version 1)
General Annotations were last modified on February 27, 2014 (version 1)
Name and origin of the protein
DescriptionTPIS_RAT.
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D GEL CHARACTERIZATION
DOI=10.1016/j.jprot.2014.04.015;
Burniston J.G., Kenyani J., Gray D., Guadagnin E., Jarman I.H., Cobley J.N., Cuthbertson D.J., Chen Y.-W., Wastling J.M., Lisboa P., Koch L.G., Britton S.L.
''Conditional independence mapping of DIGE data reveals PDIA3 protein species as key nodes associated with muscle aerobic capacity''
Journal of Proteomics 106(1):230-245 (2014)
2D PAGE maps for identified proteins
How to interpret a protein

RATTUS_SOLEUS-DIGE_4.5-9.5 {M+F HCR LCR Soleus DiGE Exp}
Rattus
Tissue: Skeletal muscle
RATTUS_SOLEUS-DIGE_4.5-9.5
  map experimental info 		 
RATTUS_SOLEUS-DIGE_4.5-9.5

MAP LOCATIONS:
pI=7.70; Mw=27345
pI=7.70; Mw=27345
pI=7.70; Mw=27345

% COVERAGE: SPOT 787: 73 [1]
SPOT 792: 67 [1]; SPOT 796: 67 [1].
MOWSE: SPOT 787: 951 [1]
SPOT 792: 884 [1]; SPOT 796: 885 [1].
NAME: SPOT 787: Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 [1]
SPOT 792: Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 [1]; SPOT 796: Triosephosphate isomerase OS=Rattus norvegicus GN=Tpi1 PE=1 [1].
Copyright
Data from Dr. Jatin G. Burniston, Research Institute for Sport and Exercise Sciences, Liverpool John Moores University, UK





Searching in 'World-2DPAGE Repository [0001]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0001):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0001)



Searching in 'World-2DPAGE Repository [0002]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0002):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0002)



Searching in 'World-2DPAGE Repository [0003]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0003):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0003)



Searching in 'World-2DPAGE Repository [0005]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0005):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0005)



Searching in 'World-2DPAGE Repository [0006]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0006):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0006)



Searching in 'World-2DPAGE Repository [0007]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0007):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0007)



Searching in 'World-2DPAGE Repository [0008]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0008):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0008)



Searching in 'World-2DPAGE Repository [0009]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0009):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0009)



Searching in 'World-2DPAGE Repository [0010]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0010):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0010)



Searching in 'World-2DPAGE Repository [0011]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0011):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0011)



Searching in 'World-2DPAGE Repository [0012]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0012):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0012)



Searching in 'World-2DPAGE Repository [0017]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0017):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0017)



Searching in 'World-2DPAGE Repository [0018]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0018):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0018)



Searching in 'World-2DPAGE Repository [0020]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0020):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0020)



Searching in 'World-2DPAGE Repository [0021]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0021):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0021)



Searching in 'World-2DPAGE Repository [0023]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0023):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0023)



Searching in 'World-2DPAGE Repository [0024]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0024):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0024)



Searching in 'World-2DPAGE Repository [0026]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0026):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0026)



Searching in 'World-2DPAGE Repository [0027]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0027):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0027)



Searching in 'World-2DPAGE Repository [0029]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0029):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0029)



Searching in 'World-2DPAGE Repository [0031]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0031):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0031)



Searching in 'World-2DPAGE Repository [0032]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0032):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0032)



Searching in 'World-2DPAGE Repository [0034]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0034):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0034)



Searching in 'World-2DPAGE Repository [0035]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0035):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0035)



Searching in 'World-2DPAGE Repository [0036]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0036):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0036)



Searching in 'World-2DPAGE Repository [0037]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0037):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0037)



Searching in 'World-2DPAGE Repository [0038]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0038):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0038)



Searching in 'World-2DPAGE Repository [0039]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0039):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0039)



Searching in 'World-2DPAGE Repository [0040]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0040):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0040)



Searching in 'World-2DPAGE Repository [0042]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0042):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0042)



Searching in 'World-2DPAGE Repository [0043]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0043):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0043)



Searching in 'World-2DPAGE Repository [0044]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0044):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0044)



Searching in 'World-2DPAGE Repository [0046]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0046):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0046)



Searching in 'World-2DPAGE Repository [0047]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0047):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0047)



Searching in 'World-2DPAGE Repository [0050]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0050):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0050)



Searching in 'World-2DPAGE Repository [0051]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0051):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0051)



Searching in 'World-2DPAGE Repository [0053]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0053):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0053)



Searching in 'World-2DPAGE Repository [0054]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0054):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0054)



Searching in 'World-2DPAGE Repository [0056]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0056):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0056)



Searching in 'World-2DPAGE Repository [0059]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0059):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0059)



Searching in 'World-2DPAGE Repository [0061]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0061):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0061)



Searching in 'World-2DPAGE Repository [0062]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0062):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0062)



Searching in 'World-2DPAGE Repository [0063]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0063):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0063)



Searching in 'World-2DPAGE Repository [0066]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0066):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0066)



Searching in 'World-2DPAGE Repository [0068]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0068):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0068)



Searching in 'World-2DPAGE Repository [0076]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0076):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0076)



Searching in 'World-2DPAGE Repository [0077]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0077):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0077)



Searching in 'World-2DPAGE Repository [0080]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0080):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0080)



Searching in 'World-2DPAGE Repository [0084]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0084):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0084)



Searching in 'World-2DPAGE Repository [0085]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0085):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0085)



Searching in 'World-2DPAGE Repository [0088]' for entry matching: TPIS_RAT




World-2DPAGE Repository (0088):  TPIS_RAT

This protein does not exist in the current release of World-2DPAGE Repository (0088)



World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server