World-2DPAGE Repository

RecName: Full=Serotransferrin; Short=Transferrin; AltName: Full=Beta-1 metal-binding globulin; AltName: Full=Liver regeneration-related protein LRRG03; AltName: Full=Siderophilin; Flags: Precursor;.

Gene name

Name=Tf

Annotated species

Rattus norvegicus (Rat) [TaxID: 10116]

Taxonomy

Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.

References

[1]	MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009)

2D PAGE maps for identified proteins

How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb

map experimental info

OB21DSUB

MAP LOCATIONS:

SPOT 162:

pI=6.59; Mw=82000

[identification data]

SPOT 170:

pI=6.78; Mw=82000

[identification data]

MAPPING (identification):

SPOT 162: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1];
SPOT 170: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India

Cross-references

UniProtKB/Swiss-Prot

P12346; TRFE_RAT.

2D PAGE maps for identified proteins
How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry name	TRFE_RAT
Primary accession number	P12346
Secondary accession number(s)	Q63602 Q64628 Q64630 Q7TNX0
Sequence was last modified on	January 9, 2007 (version 3)
Annotations were last modified on	November 16, 2011 (version 108)
Name and origin of the protein
Description	RecName: Full=Serotransferrin; Short=Transferrin; AltName: Full=Beta-1 metal-binding globulin; AltName: Full=Liver regeneration-related protein LRRG03; AltName: Full=Siderophilin; Flags: Precursor;
Gene name	Name=Tf
Encoded on	Name=Tf
Keywords	Alternative splicing; Complete proteome; Direct protein sequencing; Disulfide bond; Glycoprotein; Ion transport; Iron; Iron transport; Metal-binding; Methylation; Phosphoprotein; Reference proteome; Repeat; Secreted; Signal; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL	X77158; CAA54403.1; -; mRNA
EMBL	D38380; BAA07458.1; -; mRNA
EMBL	AY327504; AAP97736.1; -; mRNA
EMBL	BC087021; AAH87021.1; -; mRNA
EMBL	M26113; AAA42266.1; -; mRNA
EMBL	M27966; AAA42267.1; -; mRNA
IPI	IPI00475946; -; .
IPI	IPI00679202; -; .
PIR	S49163; S49163; .
RefSeq	NP_001013128.1; NM_001013110.1; .
UniGene	Rn.91296; -; .
ProteinModelPortal	P12346; -; .
SMR	P12346; 22-697; .
STRING	P12346; -; .
Allergome	1417; Rat n Transferrin; .
MEROPS	S60.972; -; .
GlycoSuiteDB	P12346; -; .
PhosphoSite	P12346; -; .
World-2DPAGE	0004:P12346; -; .
PRIDE	P12346; -; .
Ensembl	ENSRNOT00000012946; ENSRNOP00000012946; ENSRNOG00000030625; .
Ensembl	ENSRNOT00000045628; ENSRNOP00000045637; ENSRNOG00000030625; .
GeneID	24825; -; .
KEGG	rno:24825; -; .
UCSC	NM_001013110; rat; .
CTD	7018; -; .
RGD	3845; Tf; .
eggNOG	roNOG10662; -; .
GeneTree	ENSGT00390000001619; -; .
HOVERGEN	HBG000055; -; .
NextBio	604536; -; .
ArrayExpress	P12346; -; .
Genevestigator	P12346; -; .
GermOnline	ENSRNOG00000030625; Rattus norvegicus; .
GO	GO:0005604; C:basement membrane; IDA:RGD; .
GO	GO:0005615; C:extracellular space; IDA:RGD; .
GO	GO:0008199; F:ferric iron binding; IDA:RGD; .
GO	GO:0015091; F:ferric iron transmembrane transporter activity; IDA:RGD; .
GO	GO:0006953; P:acute-phase response; IEP:RGD; .
GO	GO:0006879; P:cellular iron ion homeostasis; TAS:RGD; .
GO	GO:0071320; P:cellular response to cAMP; IEP:UniProtKB; .
GO	GO:0071372; P:cellular response to follicle-stimulating hormone stimulus; IEP:UniProtKB; .
GO	GO:0031643; P:positive regulation of myelination; IDA:RGD; .
GO	GO:0001666; P:response to hypoxia; IEP:RGD; .
GO	GO:0014070; P:response to organic cyclic compound; IEP:RGD; .
InterPro	IPR001156; Peptidase_S60; .
InterPro	IPR016357; Transferrin; .
InterPro	IPR018195; Transferrin_Fe_BS; .
KO	K14736; -; .
PANTHER	PTHR11485; Peptidase_S60; 1; .
Pfam	PF00405; Transferrin; 2; .
PIRSF	PIRSF002549; Transferrin; 1; .
PRINTS	PR00422; TRANSFERRIN; .
SMART	SM00094; TR_FER; 2; .
PROSITE	PS00205; TRANSFERRIN_LIKE_1; 1; .
PROSITE	PS00206; TRANSFERRIN_LIKE_2; 2; .
PROSITE	PS00207; TRANSFERRIN_LIKE_3; 2; .
PROSITE	PS51408; TRANSFERRIN_LIKE_4; 2; .

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server

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