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World-2DPAGE Repository
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Select Remote Interfaces
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SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
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Searching in 'World-2DPAGE Repository [0022]' for entry
matching:
TRI72_RAT
World-2DPAGE Repository
(0022):
TRI72_RAT
TRI72_RAT
General information about the entry
View entry in simple text format
Entry name
TRI72_RAT
Primary accession number
A0JPQ4
integrated into World-2DPAGE Repository (0022) on
May 7, 2010 (release 1)
2D Annotations were last modified on
June 22, 2011 (version 2)
General Annotations were last modified on
November 24, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Tripartite motif-containing protein 72; AltName: Full=Mitsugumin-53; Short=Mg53;.
Gene name
Name=Trim72
Synonyms=Mg53
Annotated species
Rattus [TaxID:
10114
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]
2D-PAGE GEL CHARACTERIZATION
DOI=
10.1002/pmic.201000593
;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein
HCR_LCR_HEART
{HCR LCR Cardiac Map}
Rattus
Tissue: Heart
map experimental info
HCR_LCR_HEART
MAP LOCATIONS:
SPOT 38
:
pI=5.88; Mw=53767
[identification data]
SPOT 452
:
pI=5.88; Mw=53767
[identification data]
IDENTIFICATION:
SPOT 38: SeqCov=26.6%. Peptides MS=12/20. Mascot PMF Score=96 [
1
]
SPOT 452: SeqCov=27%. Peptides MS=11/20. Mascot PMF Score=92 [
1
].
PEPTIDE EVIDENCE:
SPOT 38: 208-ELSSLNSYLEQLR-220 (85) / 150-SVAVLEHQLVEVEETVR-166 (80) / 338-QLLSQGEHYWEVEVGDKPR-356 (96) [
1
]
SPOT 452: 208-ELSSLNSYLEQLR-220 (67) / 150-SVAVLEHQLVEVEETVR-166 (58) / 338-QLLSQGEHYWEVEVGDKPR-356 (103) [
1
].
MAPPING (identification):
SPOT
38
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
];
SPOT
452
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-Prot
A0JPQ4; TRI72_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_11
Entry name
TRI72_RAT
Primary accession number
A0JPQ4
Sequence was last modified on
December 12, 2006 (version 1)
Annotations were last modified on
November 16, 2011 (version 39)
Name and origin of the protein
Description
RecName: Full=Tripartite motif-containing protein 72; AltName: Full=Mitsugumin-53; Short=Mg53;
Gene name
Name=Trim72
Synonyms=Mg53
Encoded on
Name=Trim72; Synonyms=Mg53
Keywords
Cell membrane
;
Coiled coil
;
Complete proteome
;
Cytoplasmic vesicle
;
Disulfide bond
;
Exocytosis
;
Membrane
;
Metal-binding
;
Reference proteome
;
Transport
;
Zinc
;
Zinc-finger
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
BC127539; AAI27540.1
; -; mRNA
IPI
IPI00361208; -
; .
RefSeq
NP_001071143.1; NM_001077675.1
; .
UniGene
Rn.23565; -
; .
ProteinModelPortal
A0JPQ4; -
; .
PRIDE
A0JPQ4; -
; .
Ensembl
ENSRNOT00000029994; ENSRNOP00000030976
; ENSRNOG00000022099; .
GeneID
365377; -
; .
KEGG
rno:365377; -
; .
CTD
493829; -
; .
RGD
1562778; Trim72
; .
eggNOG
roNOG08982; -
; .
GeneTree
ENSGT00570000078805; -
; .
HOVERGEN
HBG098570; -
; .
InParanoid
A0JPQ4; -
; .
OMA
LRQELSC; -
; .
OrthoDB
EOG498V10; -
; .
NextBio
687303; -
; .
Genevestigator
A0JPQ4; -
; .
GO
GO:0030659; C:cytoplasmic vesicle membrane
; ISS:UniProtKB; .
GO
GO:0042383; C:sarcolemma
; ISS:UniProtKB; .
GO
GO:0001786; F:phosphatidylserine binding
; ISS:UniProtKB; .
GO
GO:0008270; F:zinc ion binding
; IEA:InterPro; .
GO
GO:0006887; P:exocytosis
; IEA:UniProtKB-KW; .
GO
GO:0007517; P:muscle organ development
; ISS:UniProtKB; .
GO
GO:0003012; P:muscle system process
; ISS:UniProtKB; .
GO
GO:0001778; P:plasma membrane repair
; ISS:UniProtKB; .
GO
GO:0051260; P:protein homooligomerization
; ISS:UniProtKB; .
InterPro
IPR001870; B30.2/SPRY
; .
InterPro
IPR003879; Butyrophylin
; .
InterPro
IPR008985; ConA-like_lec_gl
; .
InterPro
IPR006574; PRY
; .
InterPro
IPR003877; SPRY_rcpt
; .
InterPro
IPR000315; Znf_B-box
; .
InterPro
IPR018957; Znf_C3HC4_RING-type
; .
InterPro
IPR001841; Znf_RING
; .
InterPro
IPR013083; Znf_RING/FYVE/PHD
; .
InterPro
IPR017907; Znf_RING_CS
; .
Gene3D
G3DSA:3.30.40.10; Znf_RING/FYVE/PHD
; 1; .
KO
K12036; -
; .
Pfam
PF00622; SPRY
; 1; .
Pfam
PF00643; zf-B_box
; 1; .
Pfam
PF00097; zf-C3HC4
; 1; .
PRINTS
PR01407; BUTYPHLNCDUF
; .
SMART
SM00336; BBOX
; 1; .
SMART
SM00589; PRY
; 1; .
SMART
SM00184; RING
; 1; .
SUPFAM
SSF49899; ConA_like_lec_gl
; 1; .
PROSITE
PS50188; B302_SPRY
; 1; .
PROSITE
PS50119; ZF_BBOX
; 1; .
PROSITE
PS00518; ZF_RING_1
; 1; .
PROSITE
PS50089; ZF_RING_2
; 1; .
World-2DPAGE Repository (search AC)
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, using the
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