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Searching in 'World-2DPAGE Repository [0030]' for entry matching: UBE2N_RAT




World-2DPAGE Repository (0030):  UBE2N_RAT

UBE2N_RAT


General information about the entry
View entry in simple text format
Entry nameUBE2N_RAT
Primary accession numberQ9EQX9
integrated into World-2DPAGE Repository (0030) on November 9, 2010 (release 1)
2D Annotations were last modified onJune 21, 2011 (version 2)
General Annotations were last modified on November 23, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Ubiquitin-conjugating enzyme E2 N; EC=6.3.2.19; AltName: Full=Bendless-like ubiquitin-conjugating enzyme; AltName: Full=Ubiquitin carrier protein N; AltName: Full=Ubiquitin-protein ligase N;.
Gene nameName=Ube2n
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000006;
D'Hertog W., Maris M., Thorrez L., Waelkens E., Overbergh L., Mathieu C.
''Two-dimensional gel proteome reference map of INS-1E cells''
Proteomics 11(7):1365-1369 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

RAT_INS1E_4-7 {INS-1E cell line, a model rat cell line for pancreatic beta cells, PH4-7}
Rattus norvegicus (Rat)
RAT_INS1E_4-7
  map experimental info 		 
RAT_INS1E_4-7

MAP LOCATIONS:
pI=5.92; Mw=14913  [identification data]

IDENTIFICATION: SPOT 2830: Mascot protein score=66. Number of peptides=3 [1].
MAPPING (identification):
SPOT 2830: Tandem mass spectrometry [1].

Copyright
Data from Dr. Wannes D'Hertog, Catholic University Leuven, Belgium
Cross-references
UniProtKB/Swiss-ProtQ9EQX9; UBE2N_RAT.
World-2DPAGE RepositoryQ9EQX9; UBE2N_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameUBE2N_RAT
Primary accession numberQ9EQX9
Sequence was last modified on March 1, 2001 (version 1)
Annotations were last modified on November 16, 2011 (version 92)
Name and origin of the protein
DescriptionRecName: Full=Ubiquitin-conjugating enzyme E2 N; EC=6.3.2.19; AltName: Full=Bendless-like ubiquitin-conjugating enzyme; AltName: Full=Ubiquitin carrier protein N; AltName: Full=Ubiquitin-protein ligase N;
Gene nameName=Ube2n
Encoded onName=Ube2n
KeywordsAcetylation; ATP-binding; Complete proteome; Direct protein sequencing; DNA damage; DNA repair; Isopeptide bond; Ligase; Nucleotide-binding; Reference proteome; Ubl conjugation; Ubl conjugation pathway.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAB032739; BAB20414.1; -; mRNA
EMBLBC090072; AAH90072.1; -; mRNA
IPIIPI00190559; -; .
RefSeqNP_446380.1; NM_053928.2; .
UniGeneRn.165094; -; .
ProteinModelPortalQ9EQX9; -; .
SMRQ9EQX9; 2-150; .
IntActQ9EQX9; 1; .
MINTMINT-1775821; -; .
STRINGQ9EQX9; -; .
PhosphoSiteQ9EQX9; -; .
PRIDEQ9EQX9; -; .
EnsemblENSRNOT00000059025; ENSRNOP00000055805; ENSRNOG00000009038; .
GeneID116725; -; .
KEGGrno:116725; -; .
NMPDRfig|10116.3.peg.26666; -; .
UCSCNM_053928; rat; .
CTD7334; -; .
RGD621096; Ube2n; .
eggNOGroNOG07023; -; .
GeneTreeENSGT00540000070023; -; .
HOVERGENHBG063308; -; .
OrthoDBEOG4MCX1K; -; .
PhylomeDBQ9EQX9; -; .
NextBio619648; -; .
GenevestigatorQ9EQX9; -; .
GermOnlineENSRNOG00000009038; Rattus norvegicus; .
GOGO:0035370; C:UBC13-UEV1A complex; ISS:UniProtKB; .
GOGO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB; .
GOGO:0006281; P:DNA repair; IEA:UniProtKB-KW; .
GOGO:0070534; P:protein K63-linked ubiquitination; ISS:UniProtKB; .
GOGO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:RGD; .
InterProIPR000608; UBQ-conjugat_E2; .
InterProIPR023313; UBQ-conjugating_AS; .
InterProIPR016135; UBQ-conjugating_enzyme/RWD; .
Gene3DG3DSA:3.10.110.10; UBQ-conjugat_E2; 1; .
KOK10580; -; .
PfamPF00179; UQ_con; 1; .
SUPFAMSSF54495; UBQ-conjugat/RWD-like; 1; .
PROSITEPS00183; UBIQUITIN_CONJUGAT_1; 1; .
PROSITEPS50127; UBIQUITIN_CONJUGAT_2; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server