World-2DPAGE Home
Home  |  Contact
Due to scheduled maintenance work, this service will not be available from Tuesday August 23rd 06:00 pm until Wednesday August 24th 08:00 am CEST. Apologies for the inconvenience.

World-2DPAGE Repository 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 
Maps  [experimental info] 
[protein list] 
[graphical interface]
     Databases

use 'Ctrl' to select several
databases

Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
     
Searching in 'World-2DPAGE Repository [0022]' for entry matching: UCRI_RAT




World-2DPAGE Repository (0022):  UCRI_RAT

UCRI_RAT


General information about the entry
View entry in simple text format
Entry nameUCRI_RAT
Primary accession numberP20788
integrated into World-2DPAGE Repository (0022) on May 7, 2010 (release 1)
2D Annotations were last modified onJune 22, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Cytochrome b-c1 complex subunit Rieske, mitochondrial; EC=1.10.2.2; AltName: Full=Complex III subunit 5; AltName: Full=Cytochrome b-c1 complex subunit 5; AltName: Full=Liver regeneration-related protein LRRGT00195; AltName: Full=Rieske iron-sulfur protein; Short=RISP; AltName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit; Contains: RecName: Full=Cytochrome b-c1 complex subunit 11; AltName: Full=Complex III subunit IX; AltName: Full=Ubiquinol-cytochrome c reductase 8 kDa protein; Flags: Precursor;.
Gene nameName=Uqcrfs1
Annotated speciesRattus [TaxID: 10114]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1002/pmic.201000593;
Burniston J.G., Kenyani J., Wastling J.M., Burant C.F., Qi N.R., Koch L.G., Britton S.L.
''Proteomic analysis reveals perturbed energy metabolism and elevated oxidative stress in hearts of rats with inborn low aerobic capacity''
Proteomics 11(16):3369-3379 (2011)
2D PAGE maps for identified proteins
How to interpret a protein

HCR_LCR_HEART {HCR LCR Cardiac Map}
Rattus
Tissue: Heart
HCR_LCR_HEART
  map experimental info 		 
HCR_LCR_HEART

MAP LOCATIONS:
pI=9.04; Mw=29712  [identification data]

IDENTIFICATION: SPOT 807: SeqCov=16.8%. Peptides MS=15/20. Mascot PMF Score=62 [1].
PEPTIDE EVIDENCE: SPOT 807: 171-GKPLFVR-177 (40) / 85-VPDFSDYR-92 (69) / 85-VPDFSDYRR-93 (39) [1].
MAPPING (identification):
SPOT 807: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jatin Burniston, Liverpool John Moores University, UK
Cross-references
UniProtKB/Swiss-ProtP20788; UCRI_RAT.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_11
Entry nameUCRI_RAT
Primary accession numberP20788
Secondary accession number(s) Q6QI13
Sequence was last modified on September 13, 2004 (version 2)
Annotations were last modified on November 16, 2011 (version 101)
Name and origin of the protein
DescriptionRecName: Full=Cytochrome b-c1 complex subunit Rieske, mitochondrial; EC=1.10.2.2; AltName: Full=Complex III subunit 5; AltName: Full=Cytochrome b-c1 complex subunit 5; AltName: Full=Liver regeneration-related protein LRRGT00195; AltName: Full=Rieske iron-sulfur protein; Short=RISP; AltName: Full=Ubiquinol-cytochrome c reductase iron-sulfur subunit; Contains: RecName: Full=Cytochrome b-c1 complex subunit 11; AltName: Full=Complex III subunit IX; AltName: Full=Ubiquinol-cytochrome c reductase 8 kDa protein; Flags: Precursor;
Gene nameName=Uqcrfs1
Encoded onName=Uqcrfs1
Keywords2Fe-2S; Complete proteome; Direct protein sequencing; Disulfide bond; Electron transport; Iron; Iron-sulfur; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Oxidoreductase; Reference proteome; Respiratory chain; Transit peptide; Transmembrane; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAY539946; AAS66286.1; -; mRNA
EMBLBC085339; AAH85339.1; -; mRNA
EMBLM24542; AAA42051.1; -; Genomic_DNA
IPIIPI00362949; -; .
PIRA32296; A32296; .
RefSeqNP_001008888.1; NM_001008888.1; .
UniGeneRn.2603; -; .
ProteinModelPortalP20788; -; .
SMRP20788; 1-57; 79-274; .
IntActP20788; 1; .
STRINGP20788; -; .
Rat-heart-2DPAGEP20788; -; .
PRIDEP20788; -; .
EnsemblENSRNOT00000024609; ENSRNOP00000024609; ENSRNOG00000018281; .
GeneID291103; -; .
KEGGrno:291103; -; .
NMPDRfig|10116.3.peg.13264; -; .
UCSCNM_001008888; rat; .
CTD7386; -; .
RGD628838; Uqcrfs1; .
eggNOGroNOG07292; -; .
GeneTreeENSGT00390000001014; -; .
HOVERGENHBG001040; -; .
InParanoidP20788; -; .
OMADYRRAEV; -; .
OrthoDBEOG4VMFG4; -; .
PhylomeDBP20788; -; .
NextBio632121; -; .
ArrayExpressP20788; -; .
GenevestigatorP20788; -; .
GermOnlineENSRNOG00000018281; Rattus norvegicus; .
GOGO:0016021; C:integral to membrane; IEA:UniProtKB-KW; .
GOGO:0005750; C:mitochondrial respiratory chain complex III; IDA:RGD; .
GOGO:0051537; F:2 iron; 2 sulfur cluster binding; IEA:UniProtKB-KW
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0032403; F:protein complex binding; IDA:RGD; .
GOGO:0008121; F:ubiquinol-cytochrome-c reductase activity; TAS:RGD; .
GOGO:0022900; P:electron transport chain; IEA:UniProtKB-KW; .
GOGO:0046677; P:response to antibiotic; IEP:RGD; .
GOGO:0042493; P:response to drug; IEP:RGD; .
GOGO:0009725; P:response to hormone stimulus; IEP:RGD; .
InterProIPR011070; Globular_prot_asu/bsu; .
InterProIPR017941; Rieske_2Fe-2S; .
InterProIPR014349; Rieske_Fe-S_prot; .
InterProIPR005805; Rieske_Fe-S_prot_C; .
InterProIPR015248; Ubiqinol_cyt_c_Rdtase_N; .
InterProIPR006317; Ubiquinol_cyt_c_Rdtase_Fe-S-su; .
InterProIPR004192; Ubiquinol_cyt_Rdtase_TM; .
Gene3DG3DSA:2.102.10.10; Rieske_reg; 1; .
Gene3DG3DSA:1.20.5.270; Ubiquinol_cyt_Rdtase_TM; 1; .
KOK00411; -; .
PANTHERPTHR10134; Rieske; 1; .
PfamPF00355; Rieske; 1; .
PfamPF09165; Ubiq-Cytc-red_N; 1; .
PfamPF02921; UCR_TM; 1; .
PRINTSPR00162; RIESKE; .
SUPFAMSSF56568; AlphaBeta_subunt; 1; .
SUPFAMSSF50022; Rieske_dom; 1; .
SUPFAMSSF81502; UCR_TM_region; 1; .
TIGRFAMsTIGR01416; Rieske_proteo; 1; .
PROSITEPS51296; RIESKE; 1; .


World-2DPAGE Repository image

World-2DPAGE Repository (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server