Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.

World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0019]' for entry matching: WDR1_RAT World-2DPAGE Repository (0019):  WDR1_RAT WDR1_RAT General information about the entry View entry in simple text format Entry name WDR1_RAT Primary accession number Q5RKI0 integrated into World-2DPAGE Repository (0019) on  December 9, 2009 (release 1) 2D Annotations were last modified on May 30, 2011 (version 2) General Annotations were last modified on  January 13, 2012 (version 2) Name and origin of the protein Description RecName: Full=WD repeat-containing protein 1;. Gene name Name=Wdr1 Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   2D-PAGE GEL CHARACTERIZATION DOI=10.1111/j.1471-4159.2010.06719.x; VanGuilder H.D., Yan H., Farley J.A., Sonntag W.E., Freeman W.M. ''Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome'' J of Neurochemistry 113(6):1577-1588 (2010) 2D PAGE maps for identified proteins How to interpret a protein HIPP_SYNAP {Rat hippocampal synaptoproteome} Rattus norvegicus (Rat) Tissue: Hippocampus   map experimental info   HIPP_SYNAP MAP LOCATIONS: SPOT 325: pI=6.15; Mw=66824   [identification data] IDENTIFICATION: SPOT 325: Peptides number=4. SeqCov=5.6%. MOWSE score=3.04E+3 [1]. MAPPING (identification): SPOT 325: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Willard Freeman, Penn State College of Medicine, USA Cross-references UniProtKB/Swiss-Prot Q5RKI0; WDR1_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name WDR1_RAT Primary accession number Q5RKI0 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  November 16, 2011 (version 63) Name and origin of the protein Description RecName: Full=WD repeat-containing protein 1; Gene name Name=Wdr1 Encoded on Name=Wdr1 Keywords Acetylation; Actin-binding; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Phosphoprotein; Reference proteome; Repeat; WD repeat. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AY986483; AAX94056.1; -; mRNA EMBL BC085864; AAH85864.1; -; mRNA IPI IPI00215349; -; . RefSeq NP_001014157.1; NM_001014135.1; . UniGene Rn.3168; -; . HSSP Q11176; 1NR0; . ProteinModelPortal Q5RKI0; -; . STRING Q5RKI0; -; . PhosphoSite Q5RKI0; -; . World-2DPAGE 0004:Q5RKI0; -; . PRIDE Q5RKI0; -; . Ensembl ENSRNOT00000024012; ENSRNOP00000024012; ENSRNOG00000028498; . GeneID 360950; -; . KEGG rno:360950; -; . UCSC NM_001014135; rat; . CTD 9948; -; . RGD 1305789; Wdr1; . eggNOG roNOG12863; -; . GeneTree ENSGT00390000009416; -; . HOVERGEN HBG000780; -; . InParanoid Q5RKI0; -; . OrthoDB EOG4WH8KB; -; . PhylomeDB Q5RKI0; -; . NextBio 674693; -; . ArrayExpress Q5RKI0; -; . Genevestigator Q5RKI0; -; . GO GO:0005737; C:cytoplasm; IEA:UniProtKB-KW; . GO GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell; . GO GO:0003779; F:actin binding; IEA:UniProtKB-KW; . InterPro IPR020472; G-protein_beta_WD-40_rep; . InterPro IPR015943; WD40/YVTN_repeat-like_dom; . InterPro IPR001680; WD40_repeat; . InterPro IPR011046; WD40_repeat-like_dom; . InterPro IPR019782; WD40_repeat_2; . InterPro IPR019775; WD40_repeat_CS; . InterPro IPR017986; WD40_repeat_dom; . InterPro IPR019781; WD40_repeat_subgr; . Gene3D G3DSA:2.130.10.10; WD40/YVTN_repeat-like; 3; . Pfam PF00400; WD40; 10; . PRINTS PR00320; GPROTEINBRPT; . SMART SM00320; WD40; 11; . SUPFAM SSF50978; WD40_like; 2; . PROSITE PS00678; WD_REPEATS_1; 1; . PROSITE PS50082; WD_REPEATS_2; 5; . PROSITE PS50294; WD_REPEATS_REGION; 1; . World-2DPAGE Repository (search AC)