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Searching in 'World-2DPAGE Repository [0002]' for entry matching: Q99VM1

World-2DPAGE Repository (0002):  Q99VM1


General information about the entry
View entry in simple text format
Entry nameRF2_STAAM
Primary accession numberQ99VM1
integrated into World-2DPAGE Repository (0002) on December 7, 2005 (release 1)
2D Annotations were last modified onMay 1, 2011 (version 2)
General Annotations were last modified on November 14, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Peptide chain release factor 2; Short=RF-2;.
Gene nameName=prfB
Annotated speciesStaphylococcus aureus (strain Mu50 / ATCC 700699) [TaxID: 158878]
TaxonomyBacteria; Firmicutes; Bacillales; Staphylococcus.
PubMed=17370256; DOI=10.1002/pmic.200600925; [NCBI, EBI, Israel, Japan]
Plikat U., Voshol H., Dangendorf Y., Wiedmann B., Devay P., Mueller D., Wirth U., Szustakowski J., Chirn G.W., Inverardi B., Puyang X., Brown K., Kamp H., Hoving S., Ruchti A., Brendlen N., Peterson R., Buco J., Oostrum J., Peitsch M.C.
''From proteomics to systems biology of bacterial pathogens: approaches, tools, and applications''
Proteomics 7(6):992-1003 (2007)
2D PAGE maps for identified proteins
How to interpret a protein

STAPHY4-7 {Staphylococcus aureus, pH 4-7}
Staphylococcus aureus (strain Mu50 / ATCC 700699)
  map experimental info

pI=5.10; Mw=47000  [identification data]

AREA: SPOT 1293: 385 [1].
PEAK HEIGHT: SPOT 1293: 11281.082 [1].
STAPH_LSI: SPOT 1293: stapha_lsi_0754 [1].
MAPPING (identification):
SPOT 1293: Peptide mass fingerprinting [1].

Data from Dr. Hans Voshol, Novartis Institutes for BioMedical Research, Basel, Switzerland
UniProtKB/Swiss-ProtQ99VM1; RF2_STAAM.
World-2DPAGE RepositoryQ99VM1; RF2_STAAM.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRF2_STAAM
Primary accession numberQ99VM1
Sequence was last modified on December 21, 2004 (version 2)
Annotations were last modified on October 19, 2011 (version 55)
Name and origin of the protein
DescriptionRecName: Full=Peptide chain release factor 2; Short=RF-2;
Gene nameName=prfB
Encoded onName=prfB; OrderedLocusNames=SAV0754
KeywordsComplete proteome; Cytoplasm; Protein biosynthesis; Ribosomal frameshifting.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLBA000017; BAB56916.1; ALT_SEQ; Genomic_DNA
RefSeqNP_371278.1; NC_002758.2; .
ProteinModelPortalQ99VM1; -; .
STRINGQ99VM1; -; .
World-2DPAGE0002:Q99VM1; -; .
EnsemblBacteriaEBSTAT00000005832; EBSTAP00000005650; EBSTAG00000005831; .
GeneID1120727; -; .
GenomeReviewsBA000017_GR; SAV0754; .
KEGGsav:SAV0754; -; .
eggNOGCOG1186; -; .
GeneTreeEBGT00050000024287; -; .
HOGENOMHBG629764; -; .
ProtClustDBPRK00578; -; .
BioCycSAUR158878:SAV0754-MONOMER; -; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0016149; F:translation release factor activity; codon specific; IEA:InterPro
HAMAPMF_00094; Rel_fac_2; 1; -
InterProIPR005139; PCRF; .
InterProIPR000352; Pep_chain_release_fac_I_II; .
InterProIPR020853; Peptide_chain_release_fac2_bac; .
InterProIPR004374; PrfB; .
PANTHERPTHR11075:SF6; PrfB; 1; .
PfamPF03462; PCRF; 1; .
PfamPF00472; RF-1; 1; .
SMARTSM00937; PCRF; 1; .
TIGRFAMsTIGR00020; PrfB; 1; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server