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Searching in 'World-2DPAGE Repository [0003]' for entry matching: O80934




World-2DPAGE Repository (0003):  O80934


O80934


General information about the entry
View entry in simple text format
Entry nameY2766_ARATH
Primary accession numberO80934
Secondary accession number(s) Q94B61
integrated into World-2DPAGE Repository (0003) on October 14, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on November 15, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Uncharacterized protein At2g37660, chloroplastic; Flags: Precursor;.
Gene nameOrderedLocusNames=At2g37660
ORFNames=F13M22.16
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
PubMed=18656559; DOI=10.1016/j.jprot.2008.06.012; [NCBI, EBI, Israel, Japan]
Maldonado A.M., Echevarria-Zomeno S., Jean-Baptiste S., Hernandez M., Jorrin-Novo J.V.
''Evaluation of three different protocols of protein extraction for Arabidopsis thaliana leaf proteome analysis by two-dimensional electrophoresis''
J. Proteomics 71(4):461-472 (2008)
2D PAGE maps for identified proteins
How to interpret a protein

PHENOL_2 {Phenol 2}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
PHENOL_2
  map experimental info
 
PHENOL_2

MAP LOCATIONS:
pI=6.06; Mw=32450  [identification data]

IDENTIFICATION: SPOT 40: SeqCov=22%. Mascot (Protein score/CI%=126/100, Total ion score/CI%=51/99.98) [1].
MAPPING (identification):
SPOT 40: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].



TCA-ACETONE_3 {TCA-Acetone 3}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
TCA-ACETONE_3
  map experimental info
 
TCA-ACETONE_3

MAP LOCATIONS:
pI=6.06; Mw=32450  [identification data]

IDENTIFICATION: SPOT 40: SeqCov=22%. Mascot (Protein score/CI%=126/100, Total ion score/CI%=51/99.98) [1].
MAPPING (identification):
SPOT 40: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].



TCA-ACETONE-PHENOL_3 {TCA-Acetone-Phenol 3}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
TCA-ACETONE-PHENOL_3
  map experimental info
 
TCA-ACETONE-PHENOL_3

MAP LOCATIONS:
pI=6.06; Mw=32450  [identification data]

IDENTIFICATION: SPOT 40: SeqCov=22%. Mascot (Protein score/CI%=126/100, Total ion score/CI%=51/99.98) [1].
MAPPING (identification):
SPOT 40: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Copyright
Data from Dr. Jesus V. Jorrin-Novo, University of Cordoba, Spain
Cross-references
SWISS-2DPAGEO80934; Y2766_ARATH.
UniProtKB/Swiss-ProtO80934; Y2766_ARATH.
World-2DPAGE RepositoryO80934; Y2766_ARATH.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameY2766_ARATH
Primary accession numberO80934
Secondary accession number(s) Q94B61
Sequence was last modified on August 2, 2002 (version 2)
Annotations were last modified on September 21, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=Uncharacterized protein At2g37660, chloroplastic; Flags: Precursor;
Gene nameOrderedLocusNames=At2g37660
ORFNames=F13M22.16
Encoded onOrderedLocusNames=At2g37660; ORFNames=F13M22.16
KeywordsChloroplast; Complete proteome; Phosphoprotein; Plastid; Reference proteome; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAC004684; AAC23636.2; -; Genomic_DNA
EMBLCP002685; AEC09431.1; -; Genomic_DNA
EMBLAY042827; AAK68767.1; -; mRNA
EMBLAY081456; AAM10018.1; -; mRNA
EMBLAY085201; AAM61751.1; -; mRNA
IPIIPI00539231; -; .
PIRT02532; T02532; .
RefSeqNP_565868.1; NM_129322.3; .
UniGeneAt.26205; -; .
UniGeneAt.66411; -; .
ProteinModelPortalO80934; -; .
SMRO80934; 78-325; .
STRINGO80934; -; .
SWISS-2DPAGEO80934; -; .
World-2DPAGE0003:O80934; -; .
PRIDEO80934; -; .
ProMEXO80934; -; .
EnsemblPlantsAT2G37660.1; AT2G37660.1; AT2G37660; .
GeneID818343; -; .
GenomeReviewsCT485783_GR; AT2G37660; .
KEGGath:AT2G37660; -; .
NMPDRfig|3702.1.peg.10868; -; .
TAIRAt2g37660; -; .
eggNOGKOG1203; -; .
GeneTreeEPGT00070000029739; -; .
HOGENOMHBG734645; -; .
InParanoidO80934; -; .
OMANSIGNAN; -; .
ProtClustDBCLSN2688756; -; .
ArrayExpressO80934; -; .
GenevestigatorO80934; -; .
GermOnlineAT2G37660; Arabidopsis thaliana; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0009579; C:thylakoid; IDA:TAIR; .
GOGO:0003854; F:3-beta-hydroxy-delta5-steroid dehydrogenase activity; IEA:InterPro; .
GOGO:0005507; F:copper ion binding; IDA:TAIR; .
GOGO:0042742; P:defense response to bacterium; IEP:TAIR; .
GOGO:0006694; P:steroid biosynthetic process; IEA:InterPro; .
InterProIPR002225; 3Beta_OHSteriod_DH/Estase; .
InterProIPR016040; NAD(P)-bd_dom; .
Gene3DG3DSA:3.40.50.720; NAD(P)-bd; 1; .
PfamPF01073; 3Beta_HSD; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server