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World-2DPAGE Repository  Search by  [accession number]  [description, ID or gene]  [author names]  [spot ID / serial number]  [identification methods]  [pI / Mw range]  [combined fields]  Maps  [experimental info]  [protein list]  [graphical interface]      Databases 0001 0002 0003 0004 0005 0006 0007 0008 0009 0010 0011 0012 0014 0017 0018 0019 0020 0021 0022 0023 0024 0026 0027 0029 0030 0031 0032 0034 0035 0036 0037 0038 0039 0040 0042 0043 0044 0046 0047 0050 0051 0053 0054 0056 0059 0061 0062 0063 0066 0068 0069 0076 0077 0080 0084 0085 0088 use 'Ctrl' to select several databases Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal Exclude local DBs has only effect if a remote interface is selected

Searching in 'World-2DPAGE Repository [0004]' for entry matching: O08651 World-2DPAGE Repository (0004):  O08651 O08651 General information about the entry View entry in simple text format Entry name SERA_RAT Primary accession number O08651 integrated into World-2DPAGE Repository (0004) on  October 13, 2008 (release 1) 2D Annotations were last modified on May 18, 2011 (version 2) General Annotations were last modified on  December 22, 2011 (version 2) Name and origin of the protein Description RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=3-PGDH; EC=1.1.1.95;. Gene name Name=Phgdh Annotated species Rattus norvegicus (Rat) [TaxID: 10116] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus. References [1]   MAPPING ON GEL PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan] Maurya D.K., Sundaram C.S., Bhargava P. ''Proteome profile of the mature rat olfactory bulb'' Proteomics 9(1):2593-2599 (2009) 2D PAGE maps for identified proteins How to interpret a protein OB21DSUB {2-DE gel for Olfactory bulb proteome} Rattus norvegicus (Rat) Tissue: Olfactory bulb   map experimental info   OB21DSUB MAP LOCATIONS: SPOT 311: pI=6.33; Mw=54000   [identification data] MAPPING (identification): SPOT 311: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1]. Copyright Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India Cross-references UniProtKB/Swiss-Prot O08651; SERA_RAT. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_12 Entry name SERA_RAT Primary accession number O08651 Secondary accession number(s) Q546Q9 Sequence was last modified on  January 23, 2007 (version 3) Annotations were last modified on  November 16, 2011 (version 100) Name and origin of the protein Description RecName: Full=D-3-phosphoglycerate dehydrogenase; Short=3-PGDH; EC=1.1.1.95; Gene name Name=Phgdh Encoded on Name=Phgdh Keywords Acetylation; Amino-acid biosynthesis; Complete proteome; Direct protein sequencing; NAD; Oxidoreductase; Phosphoprotein; Reference proteome; Serine biosynthesis. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X97772; CAA66374.1; -; mRNA EMBL AJ271975; CAB89828.1; -; Genomic_DNA EMBL BC086327; AAH86327.1; -; mRNA IPI IPI00475835; -; . RefSeq NP_113808.1; NM_031620.1; . UniGene Rn.6872; -; . ProteinModelPortal O08651; -; . SMR O08651; 6-307; . IntAct O08651; 1; . STRING O08651; -; . World-2DPAGE 0004:O08651; -; . PRIDE O08651; -; . Ensembl ENSRNOT00000056173; ENSRNOP00000053019; ENSRNOG00000019328; . GeneID 58835; -; . KEGG rno:58835; -; . NMPDR fig|10116.3.peg.16688; -; . UCSC BC086327; rat; . CTD 26227; -; . RGD 61987; Phgdh; . eggNOG roNOG06496; -; . GeneTree ENSGT00530000063021; -; . HOVERGEN HBG054241; -; . InParanoid O08651; -; . OMA TGVFDGY; -; . OrthoDB EOG4Q2DF9; -; . PhylomeDB O08651; -; . BioCyc MetaCyc:MONOMER-10261; -; . NextBio 611397; -; . ArrayExpress O08651; -; . Genevestigator O08651; -; . GermOnline ENSRNOG00000019328; Rattus norvegicus; . GO GO:0051287; F:NAD binding; IEA:InterPro; . GO GO:0004617; F:phosphoglycerate dehydrogenase activity; IDA:RGD; . GO GO:0006564; P:L-serine biosynthetic process; IEA:UniProtKB-KW; . InterPro IPR006236; D-3-Phosphoglycerate_DH; . InterPro IPR006139; D-isomer_2_OHA_DH_cat_dom; . InterPro IPR006140; D-isomer_2_OHA_DH_NAD-bd; . InterPro IPR016040; NAD(P)-bd_dom; . Gene3D G3DSA:3.40.50.720; NAD(P)-bd; 2; . KO K00058; -; . PANTHER PTHR10996:SF20; D3PG_Deh; 1; . Pfam PF00389; 2-Hacid_dh; 1; . Pfam PF02826; 2-Hacid_dh_C; 1; . TIGRFAMs TIGR01327; PGDH; 1; . PROSITE PS00065; D_2_HYDROXYACID_DH_1; 1; . PROSITE PS00670; D_2_HYDROXYACID_DH_2; 1; . PROSITE PS00671; D_2_HYDROXYACID_DH_3; 1; . World-2DPAGE Repository (search AC)