World-2DPAGE Repository
Home
|
Contact
!!This displayer contains script commands. You should enable JavaScripting within your browser preferences, or use another browser!
World-2DPAGE Repository
Search by
[accession number]
[description, ID or gene]
[author names]
[spot ID / serial number]
[identification methods]
[pI / Mw range]
[combined fields]
Maps
[experimental info]
[protein list]
[graphical interface]
Databases
0001
0002
0003
0004
0005
0006
0007
0008
0009
0010
0011
0012
0014
0017
0018
0019
0020
0021
0022
0023
0024
0026
0027
0029
0030
0031
0032
0034
0035
0036
0037
0038
0039
0040
0042
0043
0044
0046
0047
0050
0051
0053
0054
0056
0059
0061
0062
0063
0066
0068
0069
0076
0077
0080
0084
0085
0088
use 'Ctrl' to select several
databases
Select Remote Interfaces
[All Interfaces]
SWISS-2DPAGE
World-2DPAGE Portal
Exclude local DBs
has only effect if a remote
interface is selected
Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
P48500
World-2DPAGE Repository
(0004):
P48500
P48500
General information about the entry
View entry in simple text format
Entry name
TPIS_RAT
Primary accession number
P48500
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;.
Gene name
Name=Tpi1
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 633
:
pI=6.67; Mw=26000
[identification data]
MAPPING (identification):
SPOT
633
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P48500; TPIS_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
TPIS_RAT
Primary accession number
P48500
Secondary accession number(s)
A0JN18 Q6P793
Sequence was last modified on
January 23, 2007 (version 2)
Annotations were last modified on
November 16, 2011 (version 86)
Name and origin of the protein
Description
RecName: Full=Triosephosphate isomerase; Short=TIM; EC=5.3.1.1; AltName: Full=Triose-phosphate isomerase;
Gene name
Name=Tpi1
Encoded on
Name=Tpi1
Keywords
Acetylation
;
Complete proteome
;
Direct protein sequencing
;
Gluconeogenesis
;
Glycolysis
;
Isomerase
;
Pentose shunt
;
Phosphoprotein
;
Reference proteome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
L36250; AAA42278.1
; -; mRNA
EMBL
BC061781; AAH61781.1
; -; mRNA
EMBL
BC126087; AAI26088.1
; -; mRNA
IPI
IPI00231767; -
; .
RefSeq
NP_075211.2; NM_022922.2
; .
UniGene
Rn.144555; -
; .
UniGene
Rn.37838; -
; .
ProteinModelPortal
P48500; -
; .
SMR
P48500; 3-249
; .
IntAct
P48500; 2
; .
STRING
P48500; -
; .
PhosphoSite
P48500; -
; .
Rat-heart-2DPAGE
P48500; -
; .
World-2DPAGE
0004:P48500; -
; .
PRIDE
P48500; -
; .
Ensembl
ENSRNOT00000020647; ENSRNOP00000020647
; ENSRNOG00000015290; .
GeneID
24849; -
; .
KEGG
rno:24849; -
; .
NMPDR
fig|10116.3.peg.22207; -
; .
UCSC
NM_022922; rat
; .
CTD
7167; -
; .
RGD
3896; Tpi1
; .
eggNOG
roNOG08237; -
; .
HOVERGEN
HBG002599; -
; .
InParanoid
P48500; -
; .
OMA
CPAIYLM; -
; .
OrthoDB
EOG40S0GF; -
; .
PhylomeDB
P48500; -
; .
NextBio
604616; -
; .
ArrayExpress
P48500; -
; .
Genevestigator
P48500; -
; .
GermOnline
ENSRNOG00000015290; Rattus norvegicus
; .
GO
GO:0005829; C:cytosol
; IDA:RGD; .
GO
GO:0005634; C:nucleus
; IDA:RGD; .
GO
GO:0005625; C:soluble fraction
; IDA:RGD; .
GO
GO:0005515; F:protein binding
; IPI:RGD; .
GO
GO:0004807; F:triose-phosphate isomerase activity
; IDA:RGD; .
GO
GO:0006094; P:gluconeogenesis
; IEA:UniProtKB-KW; .
GO
GO:0006096; P:glycolysis
; TAS:RGD; .
GO
GO:0006098; P:pentose-phosphate shunt
; IEA:UniProtKB-KW; .
InterPro
IPR013785; Aldolase_TIM
; .
InterPro
IPR022896; TrioseP_Isoase_bac/euk
; .
InterPro
IPR000652; Triosephosphate_isomerase
; .
InterPro
IPR020861; Triosephosphate_isomerase_AS
; .
Gene3D
G3DSA:3.20.20.70; Aldolase_TIM
; 1; .
KO
K01803; -
; .
PANTHER
PTHR21139; Triophos_ismrse
; 1; .
Pfam
PF00121; TIM
; 1; .
SUPFAM
SSF51351; Triophos_ismrse
; 1; .
TIGRFAMs
TIGR00419; Tim
; 1; .
PROSITE
PS00171; TIM_1
; 1; .
PROSITE
PS51440; TIM_2
; 1; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server