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World-2DPAGE Repository
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SWISS-2DPAGE
World-2DPAGE Portal
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Searching in 'World-2DPAGE Repository [0004]' for entry
matching:
P60881
World-2DPAGE Repository
(0004):
P60881
P60881
General information about the entry
View entry in simple text format
Entry name
SNP25_RAT
Primary accession number
P60881
integrated into World-2DPAGE Repository (0004) on
October 13, 2008 (release 1)
2D Annotations were last modified on
May 18, 2011 (version 2)
General Annotations were last modified on
December 22, 2011 (version 2)
Name and origin of the protein
Description
RecName: Full=Synaptosomal-associated protein 25; Short=SNAP-25; AltName: Full=Super protein; Short=SUP; AltName: Full=Synaptosomal-associated 25 kDa protein;.
Gene name
Name=Snap25
Synonyms=Snap
Annotated species
Rattus norvegicus (Rat) [TaxID:
10116
]
Taxonomy
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
References
[1]
MAPPING ON GEL
PubMed=19343716; DOI=
10.1002/pmic.200800664
; [
NCBI
,
EBI
,
Israel
,
Japan
]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein
OB21DSUB
{2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
map experimental info
OB21DSUB
MAP LOCATIONS:
SPOT 638
:
pI=4.66; Mw=26000
[identification data]
MAPPING (identification):
SPOT
638
:
Peptide mass fingerprinting
[
1
];
Tandem mass spectrometry
[
1
].
Copyright
Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
Cross-references
UniProtKB/Swiss-Prot
P60881; SNP25_RAT.
2D PAGE maps for identified proteins
How to interpret a protein map
You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
Warning 1
: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
Warning 2
: the 2D PAGE map is built on demand. This may take some few seconds to be computed.
External data extracted from
UniProtKB/Swiss-Prot
Extracted from
UniProtKB/Swiss-Prot
, release:
2011_12
Entry name
SNP25_RAT
Primary accession number
P60881
Secondary accession number(s)
P13795 P36974 P70557 P70558 Q8IXK3 Q96FM2 Q9BR45
Sequence was last modified on
April 13, 2004 (version 1)
Annotations were last modified on
December 14, 2011 (version 92)
Name and origin of the protein
Description
RecName: Full=Synaptosomal-associated protein 25; Short=SNAP-25; AltName: Full=Super protein; Short=SUP; AltName: Full=Synaptosomal-associated 25 kDa protein;
Gene name
Name=Snap25
Synonyms=Snap
Encoded on
Name=Snap25; Synonyms=Snap
Keywords
3D-structure
;
Alternative splicing
;
Cell junction
;
Cell membrane
;
Coiled coil
;
Complete proteome
;
Cytoplasm
;
Direct protein sequencing
;
Lipoprotein
;
Membrane
;
Palmitate
;
Phosphoprotein
;
Reference proteome
;
Repeat
;
Synapse
;
Synaptosome
.
Copyright
Copyrighted by the UniProt Consortium, see
https://www.uniprot.org/help/license
. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBL
AB003991; BAA20151.1
; -; mRNA
EMBL
AB003992; BAA20152.1
; -; mRNA
EMBL
AF245227; AAF81202.1
; -; mRNA
EMBL
U56262; AAA99826.1
; -; mRNA
EMBL
BC087699; AAH87699.1
; -; mRNA
EMBL
U56261; AAA99825.1
; -; mRNA
IPI
IPI00204644; -
; .
IPI
IPI00231420; -
; .
RefSeq
NP_112253.1; NM_030991.2
; .
UniGene
Rn.107689; -
; .
PDB
1JTH; X-ray
; 2.00 A; A/C=1-82
PDB
1N7S; X-ray
; 1.45 A; C=7-83
D=141-204
PDB; 1SFC; X-ray; 2.40 A
C/G/K=1-83
D/H/L=120-206; PDB; 1URQ; X-ray
2.00 A
C=7-83; D=142-204; PDB; 3HD7
X-ray
3.40 A; C/G=7-83; D/H=141-204; PDB
3IPD
X-ray; 4.80 A; C/G=7-83; D/H=141-204
PDBsum
1JTH; -
; .
PDBsum
1N7S; -
; .
PDBsum
1SFC; -
; .
PDBsum
1URQ; -
; .
PDBsum
3HD7; -
; .
PDBsum
3IPD; -
; .
ProteinModelPortal
P60881; -
; .
SMR
P60881; 10-78
; 131-204; .
DisProt
DP00068; -
; .
DIP
DIP-29205N; -
; .
IntAct
P60881; 6
; .
MINT
MINT-95953; -
; .
STRING
P60881; -
; .
PhosphoSite
P60881; -
; .
World-2DPAGE
0004:P60881; -
; .
PRIDE
P60881; -
; .
GeneID
25012; -
; .
KEGG
rno:25012; -
; .
CTD
6616; -
; .
RGD
3728; Snap25
; .
eggNOG
maNOG08467; -
; .
GeneTree
ENSGT00390000012186; -
; .
HOVERGEN
HBG056971; -
; .
InParanoid
P60881; -
; .
NextBio
605093; -
; .
PMAP-CutDB
P60881; -
; .
ArrayExpress
P60881; -
; .
Genevestigator
P60881; -
; .
GermOnline
ENSRNOG00000006037; Rattus norvegicus
; .
GO
GO:0015629; C:actin cytoskeleton
; IDA:RGD; .
GO
GO:0044295; C:axonal growth cone
; IDA:MGI; .
GO
GO:0030054; C:cell junction
; IEA:UniProtKB-KW; .
GO
GO:0005768; C:endosome
; IDA:RGD; .
GO
GO:0030175; C:filopodium
; IDA:RGD; .
GO
GO:0030027; C:lamellipodium
; IDA:RGD; .
GO
GO:0045121; C:membrane raft
; IDA:RGD; .
GO
GO:0043025; C:neuronal cell body
; IDA:RGD; .
GO
GO:0048471; C:perinuclear region of cytoplasm
; IEA:UniProtKB-SubCell; .
GO
GO:0005625; C:soluble fraction
; IDA:RGD; .
GO
GO:0045202; C:synapse
; IEA:UniProtKB-KW; .
GO
GO:0070044; C:synaptobrevin 2-SNAP-25-syntaxin-1a complex
; IDA:MGI; .
GO
GO:0070032; C:synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex
; IDA:MGI; .
GO
GO:0019717; C:synaptosome
; IDA:RGD; .
GO
GO:0008076; C:voltage-gated potassium channel complex
; IDA:RGD; .
GO
GO:0017022; F:myosin binding
; IPI:RGD; .
GO
GO:0019904; F:protein domain specific binding
; IPI:RGD; .
GO
GO:0047485; F:protein N-terminus binding
; IPI:RGD; .
GO
GO:0005484; F:SNAP receptor activity
; TAS:RGD; .
GO
GO:0017075; F:syntaxin-1 binding
; IDA:MGI; .
GO
GO:0005249; F:voltage-gated potassium channel activity
; IDA:RGD; .
GO
GO:0007409; P:axonogenesis
; IEP:RGD; .
GO
GO:0048791; P:calcium ion-dependent exocytosis of neurotransmitter
; IDA:RGD; .
GO
GO:0016197; P:endosome transport
; IDA:RGD; .
GO
GO:0006887; P:exocytosis
; TAS:RGD; .
GO
GO:0030252; P:growth hormone secretion
; IEP:RGD; .
GO
GO:0007616; P:long-term memory
; IMP:RGD; .
GO
GO:0032024; P:positive regulation of insulin secretion
; IEP:RGD; .
GO
GO:0051963; P:regulation of synapse assembly
; IEP:RGD; .
GO
GO:0030431; P:sleep
; IDA:RGD; .
InterPro
IPR000928; SNAP-25
; .
InterPro
IPR000727; T_SNARE_dom
; .
KO
K08508; -
; .
Pfam
PF00835; SNAP-25
; 1; .
Pfam
PF05739; SNARE
; 1; .
SMART
SM00397; t_SNARE
; 2; .
PROSITE
PS50192; T_SNARE
; 2; .
World-2DPAGE Repository (search AC)
Database constructed and maintained by
SIB
, using the
Make2D-DB II
package (
ver. 3.10.2
) from the
World-2DPAGE Constellation
of the
Expasy web server