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Searching in 'World-2DPAGE Repository [0004]' for entry matching: P61980

World-2DPAGE Repository (0004):  P61980


General information about the entry
View entry in simple text format
Entry nameHNRPK_RAT
Primary accession numberP61980
integrated into World-2DPAGE Repository (0004) on October 13, 2008 (release 1)
2D Annotations were last modified onMay 18, 2011 (version 2)
General Annotations were last modified on December 22, 2011 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein K; Short=hnRNP K; AltName: Full=dC stretch-binding protein; Short=CSBP;.
Gene nameName=Hnrnpk
Annotated speciesRattus norvegicus (Rat) [TaxID: 10116]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Rattus.
PubMed=19343716; DOI=10.1002/pmic.200800664; [NCBI, EBI, Israel, Japan]
Maurya D.K., Sundaram C.S., Bhargava P.
''Proteome profile of the mature rat olfactory bulb''
Proteomics 9(1):2593-2599 (2009)
2D PAGE maps for identified proteins
How to interpret a protein

OB21DSUB {2-DE gel for Olfactory bulb proteome}
Rattus norvegicus (Rat)
Tissue: Olfactory bulb
  map experimental info

pI=5.38; Mw=59000  [identification data]

MAPPING (identification):
SPOT 266: Peptide mass fingerprinting [1]; Tandem mass spectrometry [1].

Data from Dr. Purnima Bhargava, Centre for Cellular and Molecular Biology, India
UniProtKB/Swiss-ProtP61980; HNRPK_RAT.

2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_12
Entry nameHNRPK_RAT
Primary accession numberP61980
Secondary accession number(s) Q07244 Q15671 Q60577 Q922Y7 Q96J62
Sequence was last modified on June 7, 2004 (version 1)
Annotations were last modified on November 16, 2011 (version 84)
Name and origin of the protein
DescriptionRecName: Full=Heterogeneous nuclear ribonucleoprotein K; Short=hnRNP K; AltName: Full=dC stretch-binding protein; Short=CSBP;
Gene nameName=Hnrnpk
Encoded onName=Hnrnpk; Synonyms=Hnrpk
KeywordsAcetylation; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Isopeptide bond; Methylation; mRNA processing; mRNA splicing; Nucleus; Phosphoprotein; Reference proteome; Repeat; Ribonucleoprotein; RNA-binding; Spliceosome; Ubl conjugation.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLD17711; BAA04566.1; -; mRNA
IPIIPI00780608; -; .
PIRS41495; S41495; .
RefSeqNP_476482.1; NM_057141.1; .
UniGeneRn.11854; -; .
ProteinModelPortalP61980; -; .
SMRP61980; 40-215; 385-463; .
IntActP61980; 80; .
MINTMINT-1505757; -; .
STRINGP61980; -; .
PhosphoSiteP61980; -; .
World-2DPAGE0004:P61980; -; .
PRIDEP61980; -; .
EnsemblENSRNOT00000025916; ENSRNOP00000025915; ENSRNOG00000019113; .
GeneID117282; -; .
KEGGrno:117282; -; .
UCSCBC061867; rat; .
CTD3190; -; .
RGD71058; Hnrnpk; .
eggNOGroNOG14775; -; .
GeneTreeENSGT00550000074311; -; .
HOVERGENHBG051916; -; .
InParanoidP61980; -; .
PhylomeDBP61980; -; .
NextBio620239; -; .
ArrayExpressP61980; -; .
GenevestigatorP61980; -; .
GermOnlineENSRNOG00000019113; Rattus norvegicus; .
GOGO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell; .
GOGO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW; .
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GOGO:0003697; F:single-stranded DNA binding; IDA:RGD; .
GOGO:0006397; P:mRNA processing; IEA:UniProtKB-KW; .
GOGO:0008380; P:RNA splicing; IEA:UniProtKB-KW; .
InterProIPR004087; KH; .
InterProIPR004088; KH_type_1; .
InterProIPR018111; KH_type_1_subgr; .
InterProIPR012987; ROK_N; .
KOK12886; -; .
PfamPF00013; KH_1; 3; .
PfamPF08067; ROKNT; 1; .
SMARTSM00322; KH; 3; .
PROSITEPS50084; KH_TYPE_1; 3; .

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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server