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Searching in 'World-2DPAGE Repository [0020]' for entry matching: O45418




World-2DPAGE Repository (0020):  O45418


O45418


General information about the entry
View entry in simple text format
Entry nameO45418_CAEEL
Primary accession numberO45418
integrated into World-2DPAGE Repository (0020) on December 1, 2009 (release 1)
2D Annotations were last modified onJune 20, 2011 (version 2)
General Annotations were last modified on November 24, 2011 (version 2)
Name and origin of the protein
DescriptionSubName: Full=Protein F31D4.3, confirmed by transcript evidence;.
Gene nameName=fkb-6
ORFNames=F31D4.3
Annotated speciesCaenorhabditis elegans [TaxID: 6239]
TaxonomyEukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.
References
[1]   2D-PAGE GEL CHARACTERIZATION
DOI=10.1186/1745-6150-5-11;
Bogaerts A., Beets I., Temmerman L., Schoofs L., Verleyen P.
''Proteome changes of Caenorhabditis elegans upon a Staphylococcus aureus infection''
Biology direct 5(11):0-0 (2010)
2D PAGE maps for identified proteins
How to interpret a protein

CE-SA {Proteome of Caenorhabditis elegans upon a Staphylococcus aureus infection}
Caenorhabditis elegans
CE-SA
  map experimental info
 
CE-SA

MAP LOCATIONS:
pI=5.61; Mw=50804  [identification data]

IDENTIFICATION: SPOT 41: SeqCov=25%. MascotPMF=113 [1].
MAPPING (identification):
SPOT 41: Peptide mass fingerprinting [1].

Copyright
Data from Dr. Annelies Bogaerts, Katholieke Universiteit Leuven, Belgium
Cross-references
NCBI_ProteinNP_508026.1.
UniProtKB/TrEMBLO45418; O45418_CAEEL.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/TrEMBL
Extracted from UniProtKB/TrEMBL, release: 2011_11
Entry nameO45418_CAEEL
Primary accession numberO45418
Sequence was last modified on June 1, 1998 (version 1)
Annotations were last modified on November 16, 2011 (version 93)
Name and origin of the protein
DescriptionSubName: Full=Protein F31D4.3, confirmed by transcript evidence;
Gene nameName=fkb-6
ORFNames=F31D4.3
Encoded onName=fkb-6; ORFNames=F31D4.3
Keywords3D-structure; Complete proteome; Reference proteome.
Cross-references
EMBLZ92832; CAB07371.1; -; Genomic_DNA
PIRT21594; T21594; .
RefSeqNP_508026.1; NM_075625.4; .
UniGeneCel.6935; -; .
PDB1R9H; X-ray; 1.80 A; A=1-135
PDBsum1R9H; -; .
ProteinModelPortalO45418; -; .
SMRO45418; 4-406; .
STRINGO45418; -; .
World-2DPAGE0020:O45418; -; .
EnsemblMetazoaF31D4.3.1; F31D4.3.1; F31D4.3; .
EnsemblMetazoaF31D4.3.2; F31D4.3.2; F31D4.3; .
GeneID180371; -; .
KEGGcel:F31D4.3; -; .
NMPDRfig|6239.3.peg.22182; -; .
CTD180371; -; .
WormBaseF31D4.3; CE15929; WBGene00001431; fkb-6
eggNOGmeNOG04643; -; .
GeneTreeEMGT00050000007159; -; .
HOGENOMHBG521626; -; .
InParanoidO45418; -; .
OMAERDVEFD; -; .
PhylomeDBO45418; -; .
NextBio909080; -; .
ArrayExpressO45418; -; .
GOGO:0016020; C:membrane; IBA:RefGenome; .
GOGO:0005528; F:FK506 binding; IBA:RefGenome; .
GOGO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IBA:RefGenome; .
GOGO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase; .
GOGO:0040011; P:locomotion; IMP:WormBase; .
GOGO:0002009; P:morphogenesis of an epithelium; IMP:WormBase; .
GOGO:0006457; P:protein folding; IEA:InterPro; .
InterProIPR023114; Elongated_TPR_rpt_dom; .
InterProIPR023566; PPIase_FKBP; .
InterProIPR001179; PPIase_FKBP_dom; .
InterProIPR013026; TPR-contain; .
InterProIPR011990; TPR-like_helical; .
InterProIPR019734; TPR_repeat; .
Gene3DG3DSA:1.10.150.160; Elongated_TPR_rpt_dom; 1; .
Gene3DG3DSA:1.25.40.10; TPR-like_helical; 1; .
KOK09571; -; .
PANTHERPTHR10516; PPIase_FKBP; 1; .
PfamPF00254; FKBP_C; 2; .
SMARTSM00028; TPR; 3; .
PROSITEPS50059; FKBP_PPIASE; 2; .
PROSITEPS50005; TPR; 3; .
PROSITEPS50293; TPR_REGION; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server