resource logo

SWISS-2DPAGE

Attention: World-2DPAGE is no longer maintained.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P36578




SWISS-2DPAGE:  P36578


P36578


General information about the entry
View entry in simple text format
Entry nameRL4_HUMAN
Primary accession numberP36578
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 2)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=60S ribosomal protein L4; AltName: Full=60S ribosomal protein L1;.
Gene nameName=RPL4
Synonyms=RPL1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=52788  [identification data]
Mw=51716  [identification data]

MAPPING (identification):
BAND 1D-001V8K: Tandem mass spectrometry [1];
BAND 1D-001V8L: Peptide mass fingerprinting [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP36578; RL4_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRL4_HUMAN
Primary accession numberP36578
Secondary accession number(s) A8K502 P39029 Q4VBR0 Q969Z9
Sequence was last modified on January 23, 2007 (version 5)
Annotations were last modified on October 19, 2011 (version 118)
Name and origin of the protein
DescriptionRecName: Full=60S ribosomal protein L4; AltName: Full=60S ribosomal protein L1;
Gene nameName=RPL4
Synonyms=RPL1
Encoded onName=RPL4; Synonyms=RPL1
KeywordsAcetylation; Complete proteome; Direct protein sequencing; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLL20868; AAA60281.2; -; mRNA
EMBLD23660; BAA04887.1; -; mRNA
EMBLAB061820; BAB79458.1; -; Genomic_DNA
EMBLAK291117; BAF83806.1; -; mRNA
EMBLAK291859; BAF84548.1; -; mRNA
EMBLCH471082; EAW77776.1; -; Genomic_DNA
EMBLBC001365; AAH01365.1; -; mRNA
EMBLBC005817; AAH05817.1; -; mRNA
EMBLBC007748; AAH07748.1; -; mRNA
EMBLBC007996; AAH07996.1; -; mRNA
EMBLBC009888; AAH09888.1; -; mRNA
EMBLBC010151; AAH10151.1; -; mRNA
EMBLBC014653; AAH14653.1; -; mRNA
EMBLBC066925; AAH66925.1; -; mRNA
EMBLBC095427; AAH95427.1; -; mRNA
IPIIPI00003918; -; .
PIRT09551; T09551; .
RefSeqNP_000959.2; NM_000968.3; .
UniGeneHs.186350; -; .
UniGeneHs.644628; -; .
UniGeneHs.706070; -; .
ProteinModelPortalP36578; -; .
SMRP36578; 1-379; .
DIPDIP-27559N; -; .
IntActP36578; 17; .
MINTMINT-1034893; -; .
STRINGP36578; -; .
PhosphoSiteP36578; -; .
SWISS-2DPAGEP36578; -; .
PRIDEP36578; -; .
EnsemblENST00000307961; ENSP00000311430; ENSG00000174444; .
GeneID6124; -; .
KEGGhsa:6124; -; .
UCSCuc002apv.1; human; .
CTD6124; -; .
GeneCardsGC15M043627; -; .
H-InvDBHIX0012365; -; .
HGNCHGNC:10353; RPL4; .
HPAHPA034600; -; .
MIM180479; gene; .
neXtProtNX_P36578; -; .
PharmGKBPA34749; -; .
eggNOGprNOG07131; -; .
HOVERGENHBG001453; -; .
InParanoidP36578; -; .
OMATKAFRNI; -; .
OrthoDBEOG483D4X; -; .
PhylomeDBP36578; -; .
ReactomeREACT_13698; Regulation of beta-cell development; .
ReactomeREACT_15380; Diabetes pathways; .
ReactomeREACT_17015; Metabolism of proteins; .
ReactomeREACT_1762; 3' -UTR-mediated translational regulation; .
ReactomeREACT_21257; Metabolism of RNA; .
ReactomeREACT_6167; Influenza Infection; .
ReactomeREACT_71; Gene Expression; .
NextBio23787; -; .
PMAP-CutDBP36578; -; .
ArrayExpressP36578; -; .
BgeeP36578; -; .
CleanExHS_RPL4; -; .
GenevestigatorP36578; -; .
GermOnlineENSG00000174444; Homo sapiens; .
GOGO:0022625; C:cytosolic large ribosomal subunit; TAS:ProtInc; .
GOGO:0005730; C:nucleolus; IDA:HPA; .
GOGO:0003723; F:RNA binding; TAS:ProtInc; .
GOGO:0003735; F:structural constituent of ribosome; TAS:ProtInc; .
GOGO:0031018; P:endocrine pancreas development; TAS:Reactome; .
GOGO:0016071; P:mRNA metabolic process; TAS:Reactome; .
GOGO:0006414; P:translational elongation; TAS:Reactome; .
GOGO:0006415; P:translational termination; TAS:Reactome; .
GOGO:0019083; P:viral transcription; TAS:Reactome; .
InterProIPR002136; Ribosomal_L4/L1e; .
InterProIPR013000; Ribosomal_L4/L1e_euk/arc_CS; .
InterProIPR023574; Ribosomal_L4_dom; .
Gene3DG3DSA:3.40.1370.10; G3DSA:3.40.1370.10; 1; .
PfamPF00573; Ribosomal_L4; 1; .
SUPFAMSSF52166; Ribosomal_L4/L1E; 1; .
PROSITEPS00939; RIBOSOMAL_L1E; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server