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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P39207




SWISS-2DPAGE:  P39207


P39207


General information about the entry
View entry in simple text format
Entry nameNDK1_ARATH
Primary accession numberP39207
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=Nucleoside diphosphate kinase 1; EC=2.7.4.6; AltName: Full=Nucleoside diphosphate kinase I; Short=NDK I; Short=NDP kinase I; Short=NDPK I;.
Gene nameName=NDPK1
OrderedLocusNames=At4g09320
ORFNames=T30A10.80
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
[2]   MAPPING ON GEL
MEDLINE=99155804; PubMed=10036779; [NCBI, Expasy, EBI, Israel, Japan]
Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';''
Plant J. 16(1):633-641(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=6.19; Mw=19999

MAPPING (identification):
GEL MATCHING [1] WITH 2-D MAP OF LEAF SOLUBLE PROTEINS FROM PPMdb DATABASE (GHENT, BELGIUM) [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP39207; NDK1_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameNDK1_ARATH
Primary accession numberP39207
Secondary accession number(s) Q41989
Sequence was last modified on February 1, 1995 (version 1)
Annotations were last modified on October 19, 2011 (version 99)
Name and origin of the protein
DescriptionRecName: Full=Nucleoside diphosphate kinase 1; EC=2.7.4.6; AltName: Full=Nucleoside diphosphate kinase I; Short=NDK I; Short=NDP kinase I; Short=NDPK I;
Gene nameName=NDPK1
OrderedLocusNames=At4g09320
ORFNames=T30A10.80
Encoded onName=NDPK1; OrderedLocusNames=At4g09320; ORFNames=T30A10.80
Keywords3D-structure; ATP-binding; Complete proteome; Kinase; Magnesium; Metal-binding; Nucleotide metabolism; Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX69373; CAA49170.1; -; mRNA
EMBLX69376; CAA49173.1; ALT_SEQ; Genomic_DNA
EMBLAF017641; AAC17844.1; -; mRNA
EMBLAL117386; CAB55695.1; -; Genomic_DNA
EMBLAL161514; CAB78055.1; -; Genomic_DNA
EMBLZ18791; CAA79265.1; -; mRNA
IPIIPI00521214; -; .
PIRS31444; S31444; .
PIRS31446; S31446; .
PIRT17131; T17131; .
PDB1U8W; X-ray; 2.40 A; A/B/C/D/E/F=1-149
PDBsum1U8W; -; .
ProteinModelPortalP39207; -; .
SMRP39207; 1-149; .
IntActP39207; 4; .
STRINGP39207; -; .
SWISS-2DPAGEP39207; -; .
PRIDEP39207; -; .
EnsemblPlantsAT4G09320.1; AT4G09320.1; AT4G09320; .
GenomeReviewsCT486007_GR; AT4G09320; .
TAIRAt4g09320; -; .
eggNOGKOG0888; -; .
HOGENOMHBG445152; -; .
InParanoidP39207; -; .
PhylomeDBP39207; -; .
BioCycARA:AT4G09320-MONOMER; -; .
ArrayExpressP39207; -; .
GenevestigatorP39207; -; .
GermOnlineAT4G09320; Arabidopsis thaliana; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0009507; C:chloroplast; IDA:TAIR; .
GOGO:0005829; C:cytosol; IDA:TAIR; .
GOGO:0005777; C:peroxisome; IDA:TAIR; .
GOGO:0005886; C:plasma membrane; IDA:TAIR; .
GOGO:0009506; C:plasmodesma; IDA:TAIR; .
GOGO:0005774; C:vacuolar membrane; IDA:TAIR; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
GOGO:0004550; F:nucleoside diphosphate kinase activity; IEA:EC; .
GOGO:0006241; P:CTP biosynthetic process; IEA:InterPro; .
GOGO:0006183; P:GTP biosynthetic process; IEA:InterPro; .
GOGO:0046686; P:response to cadmium ion; IEP:TAIR; .
GOGO:0009651; P:response to salt stress; IEP:TAIR; .
GOGO:0006228; P:UTP biosynthetic process; IEA:InterPro; .
InterProIPR001564; Nucleoside_diP_kinase; .
InterProIPR023005; Nucleoside_diP_kinase_AS; .
Gene3DG3DSA:3.30.70.141; NDK; 1; .
PANTHERPTHR11349; Nuc_diP_kinase_core; 1; .
PfamPF00334; NDK; 1; .
PRINTSPR01243; NUCDPKINASE; .
SMARTSM00562; NDK; 1; .
SUPFAMSSF54919; NDK; 1; .
PROSITEPS00469; NDP_KINASES; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server