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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q38858




SWISS-2DPAGE:  Q38858


Q38858


General information about the entry
View entry in simple text format
Entry nameCALR2_ARATH
Primary accession numberQ38858
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onNovember 9, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Calreticulin-2; Flags: Precursor;.
Gene nameName=CRT2
Synonyms=CRTL
OrderedLocusNames=At1g09210
ORFNames=T12M4.8
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
[2]   MAPPING ON GEL
MEDLINE=99155804; PubMed=10036779; [NCBI, Expasy, EBI, Israel, Japan]
Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';''
Plant J. 16(1):633-641(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=4.33; Mw=52029

MAPPING (identification):
GEL MATCHING [1] WITH 2-D MAP OF LEAF SOLUBLE PROTEINS FROM PPMdb DATABASE (GHENT, BELGIUM) [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ38858; CALR2_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameCALR2_ARATH
Primary accession numberQ38858
Secondary accession number(s) O04152 O80486 Q94AW7
Sequence was last modified on May 29, 2007 (version 3)
Annotations were last modified on September 21, 2011 (version 109)
Name and origin of the protein
DescriptionRecName: Full=Calreticulin-2; Flags: Precursor;
Gene nameName=CRT2
Synonyms=CRTL
OrderedLocusNames=At1g09210
ORFNames=T12M4.8
Encoded onName=CRT2; Synonyms=CRTL; OrderedLocusNames=At1g09210; ORFNames=T12M4.8
KeywordsCalcium; Chaperone; Complete proteome; Disulfide bond; Endoplasmic reticulum; Glycoprotein; Lectin; Metal-binding; Phosphoprotein; Reference proteome; Repeat; Signal; Zinc.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAC003114; AAC24083.1; ALT_SEQ; Genomic_DNA
EMBLCP002684; AEE28414.1; -; Genomic_DNA
EMBLAY045656; AAK74014.1; -; mRNA
EMBLAY059662; AAL31155.1; -; mRNA
EMBLU66344; AAC49696.1; ALT_INIT; Genomic_DNA
EMBLU27698; AAA80652.1; -; mRNA
IPIIPI00527885; -; .
PIRH86224; H86224; .
RefSeqNP_172392.1; NM_100791.3; .
UniGeneAt.1529; -; .
ProteinModelPortalQ38858; -; .
SMRQ38858; 17-366; .
STRINGQ38858; -; .
SWISS-2DPAGEQ38858; -; .
PRIDEQ38858; -; .
EnsemblPlantsAT1G09210.1; AT1G09210.1; AT1G09210; .
GeneID837441; -; .
GenomeReviewsCT485782_GR; AT1G09210; .
KEGGath:AT1G09210; -; .
NMPDRfig|3702.1.peg.1140; -; .
TAIRAt1g09210; -; .
eggNOGKOG0674; -; .
HOGENOMHBG444251; -; .
InParanoidQ38858; -; .
OMADEKPEDW; -; .
PhylomeDBQ38858; -; .
ProtClustDBCLSN2914597; -; .
ArrayExpressQ38858; -; .
GenevestigatorQ38858; -; .
GOGO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell; .
GOGO:0005739; C:mitochondrion; IDA:TAIR; .
GOGO:0005773; C:vacuole; IDA:TAIR; .
GOGO:0005509; F:calcium ion binding; IEA:InterPro; .
GOGO:0005529; F:sugar binding; IEA:UniProtKB-KW; .
GOGO:0051082; F:unfolded protein binding; IEA:InterPro; .
GOGO:0006457; P:protein folding; IEA:InterPro; .
GOGO:0006979; P:response to oxidative stress; IDA:TAIR; .
GOGO:0009651; P:response to salt stress; IEP:TAIR; .
InterProIPR001580; Calret/calnex; .
InterProIPR018124; Calret/calnex_CS; .
InterProIPR009169; Calreticulin; .
InterProIPR009033; Calreticulin/calnexin_P; .
InterProIPR008985; ConA-like_lec_gl; .
InterProIPR013320; ConA-like_subgrp; .
Gene3DG3DSA:2.60.120.200; ConA_like_subgrp; 1; .
PANTHERPTHR11073; Calret/calnex; 1; .
PfamPF00262; Calreticulin; 1; .
PIRSFPIRSF002356; Calreticulin; 1; .
PRINTSPR00626; CALRETICULIN; .
SUPFAMSSF63887; Calret_calnex_P; 1; .
SUPFAMSSF49899; ConA_like_lec_gl; 1; .
PROSITEPS00803; CALRETICULIN_1; 1; .
PROSITEPS00804; CALRETICULIN_2; 1; .
PROSITEPS00805; CALRETICULIN_REPEAT; 2; .
PROSITEPS00014; ER_TARGET; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server