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SWISS-2DPAGE 
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Searching in 'SWISS-2DPAGE' for entry matching: ATPB_MOUSE




SWISS-2DPAGE:  ATPB_MOUSE


ATPB_MOUSE


General information about the entry
View entry in simple text format
Entry nameATPB_MOUSE
Primary accession numberP56480
integrated into SWISS-2DPAGE on September 1, 1998 (release 7)
2D Annotations were last modified onOctober 1, 2001 (version 3)
General Annotations were last modified on May 19, 2011 (version 10)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit beta, mitochondrial; EC=3.6.3.14; Flags: Precursor;.
Gene nameName=Atp5b
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
References
[1]   MAPPING ON GEL
MEDLINE=96154592; PubMed=8586073; [NCBI, ExPASy, EBI, Israel, Japan]
Anderson N.L., Esquer-Blasco R., Hoffmann J.-P., Meheus L., Raymackers J., Steiner S., Witzmann F., Anderson N.G.
''''''An updated two-dimensional gel database of rat liver proteins useful in gene regulation and drug effect studies'';'';''
Electrophoresis 16(1):1977-1981(1995)
[2]   MAPPING ON GEL
MEDLINE=93162044; PubMed=1286668; [NCBI, ExPASy, EBI, Israel, Japan]
Giometti C.S., Taylor J., Tollaksen S.L.
''''''Mouse liver protein database: a catalog of proteins detected by two- dimensional gel electrophoresis'';'';''
Electrophoresis 13(1):970-991(1992)
[3]   MAPPING ON GEL
PubMed=11680894; [NCBI, ExPASy, EBI, Israel, Japan]
Sanchez J.-C., Chiappe D., Converset V., Hoogland C., Binz P.-A., Paesano S., Appel R.D., Wang S., Sennitt M., Nolan A., Cawthorne M.A., Hochstrasser D.F.
''''''The mouse SWISS-2DPAGE database: a tool for proteomics study of diabetes and obesity'';'';''
Proteomics 1(1):136-163(2001)
2D PAGE maps for identified proteins
How to interpret a protein

BAT_MOUSE {Brown adipose tissue}
Mus musculus (Mouse)
Tissue: Brown adipose tissue
BAT_MOUSE
  map experimental info
  protein estimated location
 
BAT_MOUSE

MAP LOCATIONS:
pI=5.06; Mw=46285  [identification data]
pI=5.10; Mw=45996

MAPPING (identification):
SPOT 2D-001PRN: Peptide mass fingerprinting [3];
SPOT 2D-001PRV: GEL MATCHING WITH WAT_MOUSE [3].



ISLETS_MOUSE {Pancreatic islet cells}
Mus musculus (Mouse)
Tissue: Pancreatic islet
ISLETS_MOUSE
  map experimental info
  protein estimated location
 
ISLETS_MOUSE

MAP LOCATIONS:
pI=5.04; Mw=56266  [identification data]
pI=5.06; Mw=54735  [identification data]
pI=5.05; Mw=52517  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [3].



LIVER_MOUSE {Liver}
Mus musculus (Mouse)
Tissue: Liver
LIVER_MOUSE
  map experimental info
  protein estimated location
 
LIVER_MOUSE

MAP LOCATIONS:
pI=5.01; Mw=49493  [identification data]
pI=5.05; Mw=49082

MAPPING (identification):
MATCHING [3] WITH ANDERSON MOUSE AND RAT LIVER 2-DE MAPS [1], AND WITH GIOMETTI MOUSE LIVER 2-DE MAP [2], AND MICROSEQUENCING [3];
SPOT 2D-0013GL: Peptide mass fingerprinting [3].



MUSCLE_MOUSE {Gastrocnemius muscle}
Mus musculus (Mouse)
Tissue: Gastrocnemius
MUSCLE_MOUSE
  map experimental info
  protein estimated location
 
MUSCLE_MOUSE

MAP LOCATIONS:
pI=4.95; Mw=51229
pI=4.99; Mw=50947  [identification data]
pI=5.04; Mw=50527  [identification data]

MAPPING (identification):
MATCHING WITH THE MOUSE LIVER MASTER GEL [3]; SPOTS 2D-0016W2, 2D-0016W3: Peptide mass fingerprinting [3].



WAT_MOUSE {White adipose tissue}
Mus musculus (Mouse)
Tissue: White adipose tissue
WAT_MOUSE
  map experimental info
  protein estimated location
 
WAT_MOUSE

MAP LOCATIONS:
pI=5.07; Mw=49124
pI=5.12; Mw=48971
pI=4.99; Mw=44437  [identification data]

MAPPING (identification):
SPOTS 1B4*: MATCHING WITH THE MOUSE LIVER MASTER GEL [3];
SPOT 2D-001B95: Peptide mass fingerprinting [3].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
COMPLUYEAST-2DPAGEP56480; ATPB_MOUSE.
REPRODUCTION-2DPAGEP56480; P56480.
REPRODUCTION-2DPAGEIPI00468481; IPI00468481.
UCD-2DPAGEP56480; ATPB_MOUSE.
UniProtKB/Swiss-ProtP56480; ATPB_MOUSE.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameATPB_MOUSE
Primary accession numberP56480
Secondary accession number(s) Q0QEP4 Q3TFD7 Q3TIP9 Q3TK44 Q3TWD5 Q3TX28 Q3U6U4 Q3U774 Q3UB69 Q3UF69 Q8CI65 Q8VEJ5 Q9CTI7 Q9CWX7
Sequence was last modified on May 2, 2002 (version 2)
Annotations were last modified on September 21, 2011 (version 119)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit beta, mitochondrial; EC=3.6.3.14; Flags: Precursor;
Gene nameName=Atp5b
Encoded onName=Atp5b
KeywordsAcetylation; ATP synthesis; ATP-binding; CF(1); Complete proteome; Direct protein sequencing; Hydrogen ion transport; Hydrolase; Ion transport; Membrane; Mitochondrion; Mitochondrion inner membrane; Nucleotide-binding; Phosphoprotein; Reference proteome; Transit peptide; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAF030559; AAB86421.1; -; mRNA
EMBLAK003460; BAB22802.1; -; mRNA
EMBLAK010314; BAB26846.1; -; mRNA
EMBLAK084009; BAC39095.1; -; mRNA
EMBLAK145684; BAE26587.1; -; mRNA
EMBLAK148891; BAE28692.1; -; mRNA
EMBLAK150599; BAE29691.1; -; mRNA
EMBLAK151081; BAE30095.1; -; mRNA
EMBLAK151600; BAE30540.1; -; mRNA
EMBLAK152788; BAE31497.1; -; mRNA
EMBLAK152976; BAE31630.1; -; mRNA
EMBLAK153099; BAE31720.1; -; mRNA
EMBLAK159444; BAE35088.1; -; mRNA
EMBLAK159737; BAE35331.1; -; mRNA
EMBLAK159978; BAE35529.1; -; mRNA
EMBLAK160199; BAE35689.1; -; mRNA
EMBLAK160608; BAE35911.1; -; mRNA
EMBLAK164383; BAE37764.1; -; mRNA
EMBLAK166525; BAE38829.1; -; mRNA
EMBLAK166603; BAE38888.1; -; mRNA
EMBLAK166979; BAE39161.1; -; mRNA
EMBLAK167119; BAE39267.1; -; mRNA
EMBLAK167160; BAE39301.1; -; mRNA
EMBLAK167728; BAE39769.1; -; mRNA
EMBLAK167764; BAE39797.1; -; mRNA
EMBLAK168692; BAE40537.1; -; mRNA
EMBLAK168941; BAE40749.1; -; mRNA
EMBLAK169184; BAE40961.1; -; mRNA
EMBLBC018392; AAH18392.1; -; mRNA
EMBLBC037127; AAH37127.1; ALT_INIT; mRNA
EMBLBC046616; AAH46616.1; -; mRNA
EMBLDQ403100; ABD77233.1; -; mRNA
IPIIPI00468481; -; .
RefSeqNP_058054.2; NM_016774.3; .
UniGeneMm.238973; -; .
ProteinModelPortalP56480; -; .
SMRP56480; 51-527; .
IntActP56480; 22; .
STRINGP56480; -; .
PhosphoSiteP56480; -; .
SWISS-2DPAGEP56480; -; .
COMPLUYEAST-2DPAGEP56480; -; .
REPRODUCTION-2DPAGEIPI00468481; -; .
REPRODUCTION-2DPAGEP56480; -; .
UCD-2DPAGEP56480; -; .
PRIDEP56480; -; .
EnsemblENSMUST00000026459; ENSMUSP00000026459; ENSMUSG00000025393; .
GeneID11947; -; .
KEGGmmu:11947; -; .
NMPDRfig|10090.3.peg.23008; -; .
UCSCuc007hle.1; mouse; .
CTD506; -; .
MGIMGI:107801; Atp5b; .
eggNOGroNOG07745; -; .
GeneTreeENSGT00550000074800; -; .
HOVERGENHBG004307; -; .
InParanoidP56480; -; .
OMAIGQEHYD; -; .
OrthoDBEOG4ZCT4C; -; .
PhylomeDBP56480; -; .
NextBio280061; -; .
ArrayExpressP56480; -; .
BgeeP56480; -; .
GenevestigatorP56480; -; .
GermOnlineENSMUSG00000025393; Mus musculus; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0046933; F:hydrogen ion transporting ATP synthase activity; rotational mechanism; IEA:InterPro
GOGO:0008553; F:hydrogen-exporting ATPase activity; phosphorylative mechanism; IEA:InterPro
GOGO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro; .
GOGO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro; .
GOGO:0006629; P:lipid metabolic process; IMP:MGI; .
GOGO:0006933; P:negative regulation of cell adhesion involved in substrate-bound cell migration; IMP:MGI; .
InterProIPR020003; ATPase_a/bsu_AS; .
InterProIPR003593; ATPase_AAA+_core; .
InterProIPR005722; ATPase_F1-cplx_bsu; .
InterProIPR018118; ATPase_F1/A1-cplx_a/bsu_N; .
InterProIPR000793; ATPase_F1/V1/A1-cplx_a/bsu_C; .
InterProIPR004100; ATPase_F1/V1/A1-cplx_a/bsu_N; .
InterProIPR000194; ATPase_F1/V1/A1_a/bsu_nucl-bd; .
InterProIPR024034; ATPase_F1_bsu/V1_C; .
Gene3DG3DSA:1.10.1140.10; G3DSA:1.10.1140.10; 1; .
PANTHERPTHR15184:SF8; ATPase_F1_b; 1; .
PfamPF00006; ATP-synt_ab; 1; .
PfamPF00306; ATP-synt_ab_C; 1; .
PfamPF02874; ATP-synt_ab_N; 1; .
SMARTSM00382; AAA; 1; .
SUPFAMSSF47917; ATPase_a/b_C; 1; .
SUPFAMSSF50615; ATPase_a/b_N; 1; .
TIGRFAMsTIGR01039; AtpD; 1; .
PROSITEPS00152; ATPASE_ALPHA_BETA; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server