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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: ATPD_STAAN




SWISS-2DPAGE:  ATPD_STAAN


ATPD_STAAN


General information about the entry
View entry in simple text format
Entry nameATPD_STAAN
Primary accession numberP99109
integrated into SWISS-2DPAGE on March 31, 2004 (release 17)
2D Annotations were last modified onMarch 31, 2004 (version 1)
General Annotations were last modified on May 19, 2011 (version 4)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit delta; AltName: Full=ATP synthase F(1) sector subunit delta; AltName: Full=F-type ATPase subunit delta; Short=F-ATPase subunit delta;.
Gene nameName=atpH
OrderedLocusNames=SA1908
Annotated speciesStaphylococcus aureus (strain N315) [TaxID: 158879]
TaxonomyBacteria; Firmicutes; Bacillales; Staphylococcus.
References
[1]   MAPPING ON GEL
PubMed=15590099; DOI=10.1016/j.mimet.2004.09.017; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Francois P., Bento M., Deshusses J.M., Charbonnier Y., Converset V., Huyghe A., Walter N., Hoogland C., Appel R.D., Sanchez J.-C., Zimmermann-Ivol C.G., Corthals G.L., Hochstrasser D.F., Schrenzel J.
''''''Correlation of proteomic and transcriptomic profiles of Staphylococcus aureus during the post-exponential phase of growth'';'';''
J. Microbiol. Methods 60(2):247-257(2005)
Comments
  • SUBUNIT: F-type ATPases have 2 components, CF(1) - the catalytic core - and CF(0) - the membrane proton channel. CF(1) has five subunits: alpha(3), beta(3), gamma(1), delta(1), epsilon(1). CF(0) has three main subunits: a, b and c
2D PAGE maps for identified proteins
How to interpret a protein

STAPHYLOCOCCUS {Staphylococcus aureus}
Staphylococcus aureus (strain N315)
STAPHYLOCOCCUS
  map experimental info
  protein estimated location
 
STAPHYLOCOCCUS

MAP LOCATIONS:
pI=6.50; Mw=20270  [identification data]

MAPPING (identification):
MALDI tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP99109; ATPD_STAAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameATPD_STAAN
Primary accession numberP99109
Secondary accession number(s) Q99SF2
Sequence was last modified on October 11, 2004 (version 1)
Annotations were last modified on October 19, 2011 (version 50)
Name and origin of the protein
DescriptionRecName: Full=ATP synthase subunit delta; AltName: Full=ATP synthase F(1) sector subunit delta; AltName: Full=F-type ATPase subunit delta; Short=F-ATPase subunit delta;
Gene nameName=atpH
OrderedLocusNames=SA1908
Encoded onName=atpH; OrderedLocusNames=SA1908
KeywordsATP synthesis; Cell membrane; CF(1); Complete proteome; Hydrogen ion transport; Ion transport; Membrane; Transport.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLBA000018; BAB43192.1; -; Genomic_DNA
PIRG90003; G90003; .
RefSeqNP_375213.1; NC_002745.2; .
ProteinModelPortalP99109; -; .
STRINGP99109; -; .
SWISS-2DPAGEP99109; -; .
EnsemblBacteriaEBSTAT00000002334; EBSTAP00000002334; EBSTAG00000002334; .
GeneID1124809; -; .
GenomeReviewsBA000018_GR; SA1908; .
KEGGsau:SA1908; -; .
eggNOGCOG0712; -; .
GeneTreeEBGT00050000024847; -; .
HOGENOMHBG535450; -; .
OMAVTTPYAE; -; .
ProtClustDBPRK05758; -; .
BioCycSAUR158879:SA1908-MONOMER; -; .
GOGO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell; .
GOGO:0045261; C:proton-transporting ATP synthase complex; catalytic core F(1); IEA:UniProtKB-KW
GOGO:0046933; F:hydrogen ion transporting ATP synthase activity; rotational mechanism; IEA:InterPro
GOGO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro; .
HAMAPMF_01416; ATP_synth_delta_bact; 1; -
InterProIPR000711; ATPase_F1-cplx_OSCP/dsu; .
InterProIPR020781; ATPase_F1-cplx_OSCP/dsu_CS; .
Gene3DG3DSA:1.10.520.20; ATPase_F1_OSCP/d; 1; .
PANTHERPTHR11910; ATPase_F1_OSCP/d; 1; .
PfamPF00213; OSCP; 1; .
PRINTSPR00125; ATPASEDELTA; .
SUPFAMSSF47928; ATPsynt_OSCP; 1; .
TIGRFAMsTIGR01145; ATP_synt_delta; 1; .
PROSITEPS00389; ATPASE_DELTA; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server