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Sample Preparation and Post-separation Analysis

Searching in 'SWISS-2DPAGE' for entry matching: DEGQ_ECOLI



General information about the entry
View entry in simple text format
Entry nameDEGQ_ECOLI
Primary accession numberP39099
integrated into SWISS-2DPAGE on September 1, 1997 (release 6)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 10)
Name and origin of the protein
DescriptionRecName: Full=Protease degQ; EC=3.4.21.-; Flags: Precursor;.
Gene nameName=degQ
OrderedLocusNames=b3234, JW3203
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
MEDLINE=98410772; PubMed=9740056; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Walsh B.J., Sanchez J.-C., Ou K., Wilkins M.R., Tyler M., Frutiger S., Gooley A.A., Pescaru I., Appel R.D., Yan J.X., Bairoch A., Hoogland C., Morch F.S., Hughes G.J., Williams K.L., Hochstrasser D.F.
'''''''98 Escherichia coli SWISS-2DPAGE database update'';'';''
Electrophoresis 19(1):1960-1971(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
  map experimental info
  protein estimated location

pI=5.34; Mw=46601

MAPPING (identification):

This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See or send email from
2DBase-EcoliP39099; DEGQ_ECOLI.
UniProtKB/Swiss-ProtP39099; DEGQ_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameDEGQ_ECOLI
Primary accession numberP39099
Secondary accession number(s) Q2M8X9
Sequence was last modified on February 1, 1995 (version 1)
Annotations were last modified on October 19, 2011 (version 104)
Name and origin of the protein
DescriptionRecName: Full=Protease degQ; EC=3.4.21.-; Flags: Precursor;
Gene nameName=degQ
OrderedLocusNames=b3234, JW3203
Encoded onName=degQ; Synonyms=hhoA; OrderedLocusNames=b3234, JW3203
Keywords3D-structure; Complete proteome; Direct protein sequencing; Hydrolase; Periplasm; Protease; Reference proteome; Repeat; Serine protease; Signal.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLU15661; AAC43992.1; -; Genomic_DNA
EMBLU32495; AAC44005.1; -; Genomic_DNA
EMBLU18997; AAA58036.1; -; Genomic_DNA
EMBLU00096; AAC76266.1; -; Genomic_DNA
EMBLAP009048; BAE77277.1; -; Genomic_DNA
PIRJC6051; JC6051; .
RefSeqNP_417701.1; NC_000913.2; .
PDB3STI; X-ray; 2.60 A; A/B/C=28-264
PDB3STJ; X-ray; 2.60 A; A/B/C/D/E/F/G/H/I/J/K/L=28-364
PDBsum3STI; -; .
PDBsum3STJ; -; .
ProteinModelPortalP39099; -; .
SMRP39099; 38-453; .
DIPDIP-9424N; -; .
IntActP39099; 8; .
MINTMINT-1246722; -; .
MEROPSS01.274; -; .
SWISS-2DPAGEP39099; -; .
2DBase-EcoliP39099; -; .
EnsemblBacteriaEBESCT00000002944; EBESCP00000002944; EBESCG00000002409; .
EnsemblBacteriaEBESCT00000014642; EBESCP00000013933; EBESCG00000013703; .
GeneID947812; -; .
GenomeReviewsAP009048_GR; JW3203; .
GenomeReviewsU00096_GR; b3234; .
KEGGecj:JW3203; -; .
KEGGeco:b3234; -; .
EchoBASEEB2496; -; .
EcoGeneEG12612; degQ; .
eggNOGCOG0265; -; .
GeneTreeEBGT00050000010522; -; .
HOGENOMHBG585708; -; .
ProtClustDBPRK10139; -; .
BioCycEcoCyc:G7682-MONOMER; -; .
BioCycMetaCyc:G7682-MONOMER; -; .
GenevestigatorP39099; -; .
GOGO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell; .
GOGO:0004252; F:serine-type endopeptidase activity; IEA:InterPro; .
GOGO:0006508; P:proteolysis; IEA:InterPro; .
InterProIPR001478; PDZ/DHR/GLGF; .
InterProIPR009003; Pept_cys/ser_Trypsin-like; .
InterProIPR011782; Pept_S1C_Do; .
InterProIPR001254; Peptidase_S1_S6; .
InterProIPR001940; Peptidase_S1C; .
PfamPF00595; PDZ; 2; .
PfamPF00089; Trypsin; 1; .
SMARTSM00228; PDZ; 2; .
SUPFAMSSF50156; PDZ; 2; .
SUPFAMSSF50494; Pept_Ser_Cys; 1; .
TIGRFAMsTIGR02037; DegP_htrA_DO; 1; .
PROSITEPS50106; PDZ; 2; .


SWISS-2DPAGE (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server