World-2DPAGE Home
Home  |  Contact

Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: GREA_ECOLI




SWISS-2DPAGE:  GREA_ECOLI


GREA_ECOLI


General information about the entry
View entry in simple text format
Entry nameGREA_ECOLI
Primary accession numberP0A6W5
Secondary accession number(s) P21346
integrated into SWISS-2DPAGE on September 1, 1997 (release 6)
2D Annotations were last modified onMay 15, 2003 (version 2)
General Annotations were last modified on May 19, 2011 (version 11)
Name and origin of the protein
DescriptionRecName: Full=Transcription elongation factor greA; AltName: Full=Transcript cleavage factor greA;.
Gene nameName=greA
OrderedLocusNames=b3181, JW3148
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
MEDLINE=98410772; PubMed=9740056; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Walsh B.J., Sanchez J.-C., Ou K., Wilkins M.R., Tyler M., Frutiger S., Gooley A.A., Pescaru I., Appel R.D., Yan J.X., Bairoch A., Hoogland C., Morch F.S., Hughes G.J., Williams K.L., Hochstrasser D.F.
'''''''98 Escherichia coli SWISS-2DPAGE database update'';'';''
Electrophoresis 19(1):1960-1971(1998)
[2]   MAPPING ON GEL
PubMed=11680886; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
ECOLI
  map experimental info
  protein estimated location
 
ECOLI

MAP LOCATIONS:
pI=4.67; Mw=15990

MAPPING (identification):
AMINO ACID COMPOSITION AND SEQUENCE TAG (SVRR) [1].



ECOLI4-5 {Escherichia coli(4-5)}
Escherichia coli
ECOLI4-5
  map experimental info
  protein estimated location
 
ECOLI4-5

MAP LOCATIONS:
pI=4.95; Mw=13907  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEA017.6; 6TH EDITION.
UniProtKB/Swiss-ProtP0A6W5; GREA_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameGREA_ECOLI
Primary accession numberP0A6W5
Secondary accession number(s) P21346 P78111 Q2M931 Q8X9K9
Sequence was last modified on March 29, 2005 (version 1)
Annotations were last modified on October 19, 2011 (version 67)
Name and origin of the protein
DescriptionRecName: Full=Transcription elongation factor greA; AltName: Full=Transcript cleavage factor greA;
Gene nameName=greA
OrderedLocusNames=b3181, JW3148
Encoded onName=greA; OrderedLocusNames=b3181, JW3148
Keywords3D-structure; Complete proteome; DNA-binding; Reference proteome; Transcription; Transcription regulation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX54718; CAA38521.1; -; Genomic_DNA
EMBLU01376; AAA97506.1; -; Genomic_DNA
EMBLU18997; AAA57982.1; ALT_INIT; Genomic_DNA
EMBLU00096; AAC76213.2; -; Genomic_DNA
EMBLAP009048; BAE77225.1; -; Genomic_DNA
PIRG65108; G65108; .
RefSeqNP_417648.4; NC_000913.2; .
PDB1GRJ; X-ray; 2.20 A; A=1-158
PDBsum1GRJ; -; .
ProteinModelPortalP0A6W5; -; .
SMRP0A6W5; 2-137; .
DIPDIP-35800N; -; .
IntActP0A6W5; 51; .
SWISS-2DPAGEP0A6W5; -; .
ECO2DBASEA017.6; 6TH EDITION; .
EnsemblBacteriaEBESCT00000000720; EBESCP00000000720; EBESCG00000000597; .
EnsemblBacteriaEBESCT00000016022; EBESCP00000015313; EBESCG00000015082; .
GeneID947696; -; .
GenomeReviewsAP009048_GR; JW3148; .
GenomeReviewsU00096_GR; b3181; .
KEGGecj:JW3148; -; .
KEGGeco:b3181; -; .
EchoBASEEB0410; -; .
EcoGeneEG10415; greA; .
eggNOGCOG0782; -; .
GeneTreeEBGT00050000010088; -; .
HOGENOMHBG753387; -; .
OMAHNEGRIA; -; .
ProtClustDBPRK00226; -; .
BioCycEcoCyc:EG10415-MONOMER; -; .
GenevestigatorP0A6W5; -; .
GOGO:0005737; C:cytoplasm; IDA:UniProtKB; .
GOGO:0003677; F:DNA binding; IEA:UniProtKB-KW; .
GOGO:0032784; P:regulation of transcription elongation; DNA-dependent; IEA:InterPro
GOGO:0006351; P:transcription; DNA-dependent; IEA:UniProtKB-KW
HAMAPMF_00105; GreA_GreB; 1; -
InterProIPR018151; TF_GreA/GreB_CS; .
InterProIPR006359; Tscrpt_elong_fac_GreA; .
InterProIPR023459; Tscrpt_elong_fac_GreA/B; .
InterProIPR001437; Tscrpt_elong_fac_GreA/B_C; .
InterProIPR022691; Tscrpt_elong_fac_GreA/B_N; .
Gene3DG3DSA:1.10.287.180; GreA_GreB_reg; 1; .
Gene3DG3DSA:3.10.50.30; GreA_GreB_reg; 1; .
PfamPF01272; GreA_GreB; 1; .
PfamPF03449; GreA_GreB_N; 1; .
PIRSFPIRSF006092; GreA_GreB; 1; .
SUPFAMSSF46557; GreA_GreB; 1; .
TIGRFAMsTIGR01462; GreA; 1; .
PROSITEPS00829; GREAB_1; 1; .
PROSITEPS00830; GREAB_2; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server