resource logo

SWISS-2DPAGE

Attention: World-2DPAGE is no longer maintained.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: ODPB_YEAST




SWISS-2DPAGE:  ODPB_YEAST


ODPB_YEAST


General information about the entry
View entry in simple text format
Entry nameODPB_YEAST
Primary accession numberP32473
integrated into SWISS-2DPAGE on February 1, 1995 (release 1)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 10)
Name and origin of the protein
DescriptionRecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; EC=1.2.4.1; AltName: Full=Pyruvate dehydrogenase complex component E1 beta; Short=PDHE1-B; Flags: Precursor;.
Gene nameName=PDB1
OrderedLocusNames=YBR221C
ORFNames=YBR1511
Annotated speciesSaccharomyces cerevisiae (Baker's yeast) [TaxID: 4932]
TaxonomyEukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces.
References
[1]   MAPPING ON GEL
MEDLINE=96314060; PubMed=8740180; [NCBI, Expasy, EBI, Israel, Japan]
Sanchez J.-C., Golaz O., Frutiger S., Schaller D., Appel R.D., Bairoch A., Hughes G.J., Hochstrasser D.F.
''''''The yeast SWISS-2DPAGE database'';'';''
Electrophoresis 17(1):556-565(1996)
[2]   MAPPING ON GEL
MEDLINE=95203288; PubMed=7895733; [NCBI, Expasy, EBI, Israel, Japan]
Garrels J.I., Futcher B., Kobayashi R., Latter G.I., Schwender B., Volpe T., Warner J.R., McLaughlin C.S.
''''''Protein identifications for a Saccharomyces cerevisiae protein database'';'';''
Electrophoresis 15(1):1466-1486(1994)
Comments
  • SUBUNIT: TETRAMER OF TWO ALPHA AND TWO BETA SUBUNITS
2D PAGE maps for identified proteins
How to interpret a protein

YEAST {Saccharomyces cerevisiae}
Saccharomyces cerevisiae (Baker's yeast)
YEAST
  map experimental info
  protein estimated location
 
YEAST

MAP LOCATIONS:
pI=4.84; Mw=32116

MAPPING (identification):
GEL MATCHING [1] AND IDENTIFIED BY GARRELS [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP32473; ODPB_YEAST.
YEPD9440.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameODPB_YEAST
Primary accession numberP32473
Secondary accession number(s) D6VQL7
Sequence was last modified on October 1, 1994 (version 2)
Annotations were last modified on September 21, 2011 (version 111)
Name and origin of the protein
DescriptionRecName: Full=Pyruvate dehydrogenase E1 component subunit beta, mitochondrial; EC=1.2.4.1; AltName: Full=Pyruvate dehydrogenase complex component E1 beta; Short=PDHE1-B; Flags: Precursor;
Gene nameName=PDB1
OrderedLocusNames=YBR221C
ORFNames=YBR1511
Encoded onName=PDB1; OrderedLocusNames=YBR221C; ORFNames=YBR1511
KeywordsComplete proteome; Direct protein sequencing; Glycolysis; Mitochondrion; Oxidoreductase; Pyruvate; Reference proteome; Thiamine pyrophosphate; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM98476; AAA34583.1; -; Genomic_DNA
EMBLZ36090; CAA85184.1; -; Genomic_DNA
EMBLAY692982; AAT93001.1; -; Genomic_DNA
EMBLBK006936; DAA07337.1; -; Genomic_DNA
PIRS46097; S46097; .
RefSeqNP_009780.1; NM_001178569.1; .
ProteinModelPortalP32473; -; .
SMRP32473; 39-365; .
DIPDIP-1499N; -; .
IntActP32473; 35; .
MINTMINT-409839; -; .
STRINGP32473; -; .
SWISS-2DPAGEP32473; -; .
PeptideAtlasP32473; -; .
EnsemblFungiYBR221C; YBR221C; YBR221C; .
GeneID852522; -; .
KEGGsce:YBR221C; -; .
NMPDRfig|4932.3.peg.491; -; .
CYGDYBR221c; -; .
SGDS000000425; PDB1; .
eggNOGfuNOG05078; -; .
GeneTreeEFGT00050000003964; -; .
HOGENOMHBG753264; -; .
OMAMEHAFDY; -; .
OrthoDBEOG42RHGZ; -; .
PhylomeDBP32473; -; .
NextBio971562; -; .
ArrayExpressP32473; -; .
GenevestigatorP32473; -; .
GermOnlineYBR221C; Saccharomyces cerevisiae; .
GOGO:0042645; C:mitochondrial nucleoid; IDA:SGD; .
GOGO:0005967; C:mitochondrial pyruvate dehydrogenase complex; IDA:SGD; .
GOGO:0004739; F:pyruvate dehydrogenase (acetyl-transferring) activity; IMP:SGD; .
GOGO:0006086; P:acetyl-CoA biosynthetic process from pyruvate; IDA:SGD; .
GOGO:0006096; P:glycolysis; IEA:UniProtKB-KW; .
InterProIPR009014; Transketo_C/Pyr-ferredox_oxred; .
InterProIPR015941; Transketolase-like_C; .
InterProIPR005475; Transketolase-like_Pyr-bd; .
InterProIPR005476; Transketolase_C; .
Gene3DG3DSA:3.40.50.920; Transketo_C_like; 1; .
PfamPF02779; Transket_pyr; 1; .
PfamPF02780; Transketolase_C; 1; .
SMARTSM00861; Transket_pyr; 1; .
SUPFAMSSF52922; Transketo_C_like; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server