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Sample Preparation and Post-separation Analysis Searching in 'SWISS-2DPAGE' for entry matching: OMPT_ECOLI SWISS-2DPAGE:  OMPT_ECOLI OMPT_ECOLI General information about the entry View entry in simple text format Entry name OMPT_ECOLI Primary accession number P09169 integrated into SWISS-2DPAGE on  May 15, 2003 (release 16) 2D Annotations were last modified on May 15, 2003 (version 1) General Annotations were last modified on  May 19, 2011 (version 7) Name and origin of the protein Description RecName: Full=Protease 7; EC=3.4.23.49; AltName: Full=Omptin; AltName: Full=Outer membrane protein 3B; AltName: Full=Protease A; AltName: Full=Protease VII; Flags: Precursor;. Gene name Name=ompT OrderedLocusNames=b0565, JW0554 Annotated species Escherichia coli [TaxID: 562] Taxonomy Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. References [1]   MAPPING ON GEL PubMed=12469338; [NCBI, Expasy, EBI, Israel, Japan] Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S. ''''''Fluorescence 2-D difference gel electrophoresis and mass spectrometry based proteomic analysis of E. coli'';'';'' Proteomics 2(1):1682-1698(2002) Comments SUBUNIT: Homopentamer (Potential) 2D PAGE maps for identified proteins How to interpret a protein ECOLI-DIGE4.5-6.5 {Escherichia coli DIGE (4.5-6.5)} Escherichia coli   map experimental info   protein estimated location   ECOLI-DIGE4.5-6.5 MAP LOCATIONS: SPOT 2D-001WO5: pI=5.36; Mw=37000   [identification data] MAPPING (identification): Peptide mass fingerprinting and tandem mass spectrometry [1]. Copyright This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss). Cross-references UniProtKB/Swiss-Prot P09169; OMPT_ECOLI. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 2011_10 Entry name OMPT_ECOLI Primary accession number P09169 Sequence was last modified on  July 1, 1989 (version 1) Annotations were last modified on  October 19, 2011 (version 112) Name and origin of the protein Description RecName: Full=Protease 7; EC=3.4.23.49; AltName: Full=Omptin; AltName: Full=Outer membrane protein 3B; AltName: Full=Protease A; AltName: Full=Protease VII; Flags: Precursor; Gene name Name=ompT OrderedLocusNames=b0565, JW0554 Encoded on Name=ompT; OrderedLocusNames=b0565, JW0554 Keywords 3D-structure; Aspartyl protease; Cell membrane; Cell outer membrane; Complete proteome; Direct protein sequencing; Hydrolase; Membrane; Protease; Reference proteome; Signal; Transmembrane; Transmembrane beta strand. Copyright Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X06903; CAA30008.1; -; Genomic_DNA EMBL M23630; AAA24430.1; -; Genomic_DNA EMBL U82598; AAB40761.1; -; Genomic_DNA EMBL U00096; AAC73666.1; -; Genomic_DNA EMBL AP009048; BAA35199.2; -; Genomic_DNA PIR A31387; A31387; . RefSeq NP_415097.1; NC_000913.2; . PDB 1I78; X-ray; 2.60 A; A/B=21-317 PDBsum 1I78; -; . ProteinModelPortal P09169; -; . SMR P09169; 21-317; . MEROPS A26.001; -; . SWISS-2DPAGE P09169; -; . EnsemblBacteria EBESCT00000003678; EBESCP00000003678; EBESCG00000003007; . EnsemblBacteria EBESCT00000018388; EBESCP00000017679; EBESCG00000017442; . GeneID 945185; -; . GenomeReviews AP009048_GR; JW0554; . GenomeReviews U00096_GR; b0565; . KEGG ecj:JW0554; -; . KEGG eco:b0565; -; . EchoBASE EB0667; -; . EcoGene EG10673; ompT; . eggNOG COG4571; -; . GeneTree EBGT00050000011956; -; . HOGENOM HBG468061; -; . OMA RDWMDSS; -; . ProtClustDB PRK10993; -; . BioCyc EcoCyc:EG10673-MONOMER; -; . BioCyc MetaCyc:EG10673-MONOMER; -; . BRENDA 3.4.23.49; 2026; . Genevestigator P09169; -; . GO GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell; . GO GO:0016021; C:integral to membrane; IEA:UniProtKB-KW; . GO GO:0005886; C:plasma membrane; IEA:UniProtKB-KW; . GO GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW; . GO GO:0006508; P:proteolysis; IEA:InterPro; . InterPro IPR020080; OM_adhesin/peptidase_omptin; . InterPro IPR023619; Peptidase_A26; . InterPro IPR020079; Peptidase_A26_CS; . InterPro IPR000036; Peptidase_A26_omptin; . Gene3D G3DSA:2.40.128.90; Peptidase_A26; 1; . Pfam PF01278; Omptin; 1; . PIRSF PIRSF001522; Peptidase_A26; 1; . PRINTS PR00482; OMPTIN; . SUPFAM SSF69917; OM_adhesin/protease_omptin; 1; . PROSITE PS00834; OMPTIN_1; 1; . PROSITE PS00835; OMPTIN_2; 1; . SWISS-2DPAGE (search AC)