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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P04391




SWISS-2DPAGE:  P04391


P04391


General information about the entry
View entry in simple text format
Entry nameOTC1_ECOLI
Primary accession numberP04391
integrated into SWISS-2DPAGE on August 1, 1995 (release 2)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 11)
Name and origin of the protein
DescriptionRecName: Full=Ornithine carbamoyltransferase chain I; EC=2.1.3.3; AltName: Full=OTCase-1;.
Gene nameName=argI
OrderedLocusNames=b4254, JW4211
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
MEDLINE=96314059; PubMed=8740179; [NCBI, ExPASy, EBI, Israel, Japan]
Pasquali C., Frutiger S., Wilkins M.R., Hughes G.J., Appel R.D., Bairoch A., Schaller D., Sanchez J.-C., Hochstrasser D.F.
''''''Two-dimensional gel electrophoresis of Escherichia coli homogenates: the Escherichia coli SWISS-2DPAGE database'';'';''
Electrophoresis 17(1):547-555(1996)
[2]   MAPPING ON GEL
Vanbogelen R.A., Abshire K.Z., Pertsemlidis A., Clark R.L., Neidhardt F.C.
''''''Gene-protein database of Escherichia coli K-12, edition 6'';'';''
(IN) Neidhardt et al. (eds.)Escherichia coli and Salmonella: Cellular and Molecular Biology (2nd ed.), pp.2067-2117, ASM Press, Washington DC (1996)
Comments
  • SUBUNIT: TRIMER OF IDENTICAL OR NONIDENTICAL CHAINS
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
ECOLI
  map experimental info
  protein estimated location
 
ECOLI

MAP LOCATIONS:
pI=5.43; Mw=39855

MAPPING (identification):
GEL MATCHING [1] AND IDENTIFIED ON 2-D GELS BY VANBOGELEN [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEF039.0; 6TH EDITION.
UniProtKB/Swiss-ProtP04391; OTC1_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameOTC1_ECOLI
Primary accession numberP04391
Secondary accession number(s) Q2M655
Sequence was last modified on January 23, 2007 (version 3)
Annotations were last modified on October 19, 2011 (version 126)
Name and origin of the protein
DescriptionRecName: Full=Ornithine carbamoyltransferase chain I; EC=2.1.3.3; AltName: Full=OTCase-1;
Gene nameName=argI
OrderedLocusNames=b4254, JW4211
Encoded onName=argI; OrderedLocusNames=b4254, JW4211
Keywords3D-structure; Amino-acid biosynthesis; Arginine biosynthesis; Complete proteome; Cytoplasm; Direct protein sequencing; Reference proteome; Transferase.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLJ02842; AAA23483.1; -; Genomic_DNA
EMBLX00210; CAA25037.1; -; Genomic_DNA
EMBLU14003; AAA97150.1; -; Genomic_DNA
EMBLU00096; AAC77211.1; -; Genomic_DNA
EMBLAP009048; BAE78251.1; -; Genomic_DNA
PIRA31314; OWECI; .
RefSeqNP_418675.1; NC_000913.2; .
PDB1AKM; X-ray; 2.80 A; A/B/C=2-334
PDB1DUV; X-ray; 1.70 A; G/H/I=2-333
PDB2OTC; X-ray; 2.80 A; A/B/C/D/E/F/G/H/I=2-334
PDBsum1AKM; -; .
PDBsum1DUV; -; .
PDBsum2OTC; -; .
ProteinModelPortalP04391; -; .
SMRP04391; 2-334; .
DIPDIP-9143N; -; .
IntActP04391; 7; .
SWISS-2DPAGEP04391; -; .
ECO2DBASEF039.0; 6TH EDITION; .
EnsemblBacteriaEBESCT00000004552; EBESCP00000004552; EBESCG00000003715; .
EnsemblBacteriaEBESCT00000014993; EBESCP00000014284; EBESCG00000014053; .
GeneID948774; -; .
GenomeReviewsAP009048_GR; JW4211; .
GenomeReviewsU00096_GR; b4254; .
KEGGecj:JW4211; -; .
KEGGeco:b4254; -; .
EchoBASEEB0067; -; .
EcoGeneEG10069; argI; .
eggNOGCOG0078; -; .
GeneTreeEBGT00050000009122; -; .
HOGENOMHBG579429; -; .
OMATTIGKEI; -; .
ProtClustDBPRK03515; -; .
BioCycEcoCyc:CHAINI-MONOMER; -; .
BioCycMetaCyc:CHAINI-MONOMER; -; .
GenevestigatorP04391; -; .
GOGO:0009348; C:ornithine carbamoyltransferase complex; IEA:InterPro; .
GOGO:0016597; F:amino acid binding; IEA:InterPro; .
GOGO:0004585; F:ornithine carbamoyltransferase activity; IDA:EcoCyc; .
GOGO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-KW; .
HAMAPMF_01109; OTCase; 1; -
InterProIPR006132; Asp/Orn_carbamoyltranf_P-bd; .
InterProIPR006130; Asp/Orn_carbamoylTrfase; .
InterProIPR006131; Asp_carbamoyltransf_Asp/Orn-bd; .
InterProIPR002292; Orn_carbamltrans; .
PfamPF00185; OTCace; 1; .
PfamPF02729; OTCace_N; 1; .
PRINTSPR00100; AOTCASE; .
PRINTSPR00102; OTCASE; .
SUPFAMSSF53671; Asp/Orn_carbamoyltranf; 1; .
TIGRFAMsTIGR00658; Orni_carb_tr; 1; .
PROSITEPS00097; CARBAMOYLTRANSFERASE; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server