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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P08670




SWISS-2DPAGE: P08670



P08670:

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ID   VIME_HUMAN; STANDARD; 2DG.
AC   P08670;
DT   09-NOV-2001, integrated into SWISS-2DPAGE (release 15).
DT   31-MAR-2004, 2D annotation version 3.
DT   19-MAY-2011, general annotation version 6.
DE   RecName: Full=Vimentin;.
GN   Name=VIM;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini;
OC   Hominidae; Homo.
OX   NCBI_TaxID=9606;
MT   LYMPHOCYTE_HUMAN, NUCLEOLI_HELA_1D_HUMAN, NUCLEOLI_HELA_2D_HUMAN.
IM   LYMPHOCYTE_HUMAN, NUCLEOLI_HELA_1D_HUMAN, NUCLEOLI_HELA_2D_HUMAN.
RN   [1]
RP   MAPPING ON GEL.
RX   PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
RA   Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C.,
RA   Greco A., Hochstrasser D.F., Diaz J.-J.;
RT   ''''''Functional proteomic analysis of human nucleolus'';'';'';
RL   Mol. Biol. Cell. 13(1):4100-4109(2002).
RN   [2]
RP   MAPPING ON GEL.
RA   Vuadens F., Crettaz D., Telenti A., Quadroni M., Duchosal M.A., Schneider
RA   P., Tissot J.-D.;
RT   ''''''New insights into HIV lymphocyte infection'';'';'';
RL   (IN) Sanchez J.-C., Corthals G.L., Hochstrasser D.F. (eds.);
RL   Biomedical Application of Proteomics, pp.245-262, Wiley-VCH, Weinheim (2004).
1D   -!- MASTER: NUCLEOLI_HELA_1D_HUMAN;
1D   -!-   MW: BAND 1D-001V8G=58189;
1D   -!-   MW: BAND 1D-001V8H=56716;
1D   -!-   PEPTIDE SEQUENCES: BAND 1D-001V8G: (R)TNEKVELQELNDR(F),100-112;
1D         (R)LGDLYEEEMR(E),145-154; (R)LGDLYEEEMoxRELR(R),145-157;
1D         (R)EEAENTLQSFR(Q),196-206; (R)KVESLQEEIAFLK(K),222-234; (R)ISLPLPNFSSLNLR(E),410-423.
1D   -!-   PEPTIDE SEQUENCES: BAND 1D-001V8H: (R)LGDLYEEEMoxRELR(R),145-157; (R)ISLPLPNFSSLNLR(E),410-423.
1D   -!-   MAPPING: Tandem mass spectrometry [1].
2D   -!- MASTER: LYMPHOCYTE_HUMAN;
2D   -!-   PI/MW: SPOT 2D-001Y0D=4.94/43308;
2D   -!-   PI/MW: SPOT 2D-001Y0H=4.99/43286;
2D   -!-   PI/MW: SPOT 2D-001Y0I=5.06/43286;
2D   -!-   PEPTIDE SEQUENCES: SPOT 2D-001Y0D: (R)FLEQQNK(I),122-128;
2D         (K)ILLAELEQLK(G),129-138; (R)QDVDNASLAR(L),207-216; (K)KVESLQEEIAFLK(K),222-235.
2D   -!-   PEPTIDE SEQUENCES: SPOT 2D-001Y0H: (R)TYSLGSALRPSTSR(S),36-49;
2D         (R)FANYIDK(V),113-119; (K)ILLAELEQLK(G),129-138;
2D         (R)RQVDQLTNDK(A),158-167; (R)QVDQLTNDK(A),159-167;
2D         (K)LQEEMLQR(E),188-195; (R)QQYESVAAK(N),273-281;
2D         (K)FADLSEAANR(N),294-303; (R)QVQSLTCEVDALK(G),321-333;
2D         (K)MALDIEIATYR(K),390-400; (K)LLEGEESR(I),402-409.
2D   -!-   PEPTIDE SEQUENCES: SPOT 2D-001Y0I: (R)SVSSSSYR(R),4-11;
2D         (R)SYVTTSTR(T),28-35; (R)TYSLGSALRPSTSR(S),36-49;
2D         (K)VELQELNDR(F),104-112; (K)ILLAELEQLK(G),129-138;
2D         (R)LGDLYEEEMR(E),145-154; (K)LQEEMLQR(E),188-195;
2D         (R)QDVDNASLARLDLER(K),207-221; (K)KVESLQEEIAFLK(K),222-235;
2D         (R)QQYESVAAK(N),273-281; (K)FADLSEAANR(N),294-303;
2D         (R)QVQSLTCEVDALK(G),321-333; (R)EMEENFAVEAANYQDTIGR(L),345-363;
2D         (K)MALDIEIATYR(K),390-400; (R)KLLEGEESR(I),401-409;
2D         (R)ISLPLPNFSSLNLR(E),410-423; (R)ETNLDSLPLVDTHSK(R),424-438; (R)DGQVINETSQHHDDLE(),450-465.
2D   -!-   EXPRESSION: expressed predominantly in CD8 and CD4 lymphocytes [2].
2D   -!-   MAPPING: MALDI tandem mass spectrometry [2].
2D   -!- MASTER: NUCLEOLI_HELA_2D_HUMAN;
2D   -!-   PI/MW: SPOT 2D-001VJV=5.21/57216;
2D   -!-   PI/MW: SPOT 2D-001VJW=5.27/57216;
2D   -!-   PEPTIDE MASSES: SPOT 2D-001VJV: 1060.5; 1093.5; 1115.5; 1125.6;
2D         1169.7; 1254.5; 1270.5; 1311.6; 1323.6; 1428.7; 1495.7; 1510.7; 1533.8;
2D         1570.9; 1587.8; 1668.8; 1766.8; 2126.1; 2187; 2202.9; TRYPSIN.
2D   -!-   PEPTIDE MASSES: SPOT 2D-001VJW: 870.4; 872.3; 905.4; 912.3; 914.4;
2D         1046.5; 1060.5; 1076.5; 1093.5; 1118.5; 1121.5; 1169.7; 1254.6; 1270.5;
2D         1308.6; 1320.6; 1323.6; 1513.6; 1533.8; 1570.9; 1587.8; 1766.8; 2187;
2D         2202.9; TRYPSIN.
2D   -!-   MAPPING: Peptide mass fingerprinting [1].
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DR   DOSAC-COBS 2D-PAGE; P08670; P08670.
DR   DOSAC-COBS-2DPAGE; P08670; VIME_HUMAN.
DR   HSC-2DPAGE; P08670; HUMAN.
DR   Lens-2DPAGE; P08670.
DR   OGP-WWW; P08670.
DR   PHCI-2DPAGE; P08670.
DR   REPRODUCTION-2DPAGE; P08670; P08670.
DR   REPRODUCTION-2DPAGE; IPI00418471; IPI00418471.
DR   Siena-2DPAGE; P08670; VIME_HUMAN.
DR   UCD-2DPAGE; P08670; VIME_HUMAN.
DR   UniProtKB/Swiss-Prot; P08670; VIME_HUMAN.
//


The following 2-D maps are available for this protein:
Lymphocytes
LYMPHOCYTE_HUMAN
SDS-PAGE of nucleolar proteins from Human HeLa cells
NUCLEOLI_HELA_1D_HUMAN
2D-PAGE of nucleolar proteins from Human HeLa cells
NUCLEOLI_HELA_2D_HUMAN


SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server