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Sample Preparation and Post-separation Analysis

Searching in 'SWISS-2DPAGE' for entry matching: P0A940



General information about the entry
View entry in simple text format
Entry nameYAET_ECOLI
Primary accession numberP0A940
Secondary accession number(s) P39170
integrated into SWISS-2DPAGE on April 1, 2000 (release 12)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=Outer membrane protein assembly factor yaeT; AltName: Full=Omp85; Flags: Precursor;.
Gene nameName=yaeT
Synonyms=yzzN, yzzY
OrderedLocusNames=b0177, JW0172
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
PubMed=11680886; [NCBI, Expasy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI5-6 {Escherichia coli(5-6)}
Escherichia coli
  map experimental info
  protein estimated location

pI=5.33; Mw=47448  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].

This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See or send email from
2DBase-EcoliP0A940; YAET_ECOLI.
UniProtKB/Swiss-ProtP0A940; YAET_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameYAET_ECOLI
Primary accession numberP0A940
Secondary accession number(s) P39170 P39181 P77465 Q548B8 Q8KR94 Q9R2E3
Sequence was last modified on July 19, 2005 (version 1)
Annotations were last modified on October 19, 2011 (version 62)
Name and origin of the protein
DescriptionRecName: Full=Outer membrane protein assembly factor yaeT; AltName: Full=Omp85; Flags: Precursor;
Gene nameName=yaeT
Synonyms=yzzN, yzzY
OrderedLocusNames=b0177, JW0172
Encoded onName=yaeT; Synonyms=yzzN, yzzY; OrderedLocusNames=b0177, JW0172
Keywords3D-structure; Cell membrane; Cell outer membrane; Complete proteome; Direct protein sequencing; Membrane; Reference proteome; Signal; Transmembrane; Transmembrane beta strand.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLAF407013; AAL01379.1; -; Genomic_DNA
EMBLAY035865; AAK64508.1; -; Genomic_DNA
EMBLU70214; AAB08606.1; -; Genomic_DNA
EMBLU00096; AAC73288.1; -; Genomic_DNA
EMBLAP009048; BAA77852.2; -; Genomic_DNA
PIRA64742; A64742; .
RefSeqNP_414719.1; NC_000913.2; .
PDB2QCZ; X-ray; 2.70 A; A/B=21-351
PDB2QDF; X-ray; 2.20 A; A=21-351
PDB2V9H; NMR; -; A=21-174
PDB3EFC; X-ray; 3.30 A; A=21-410
PDBsum2QCZ; -; .
PDBsum2QDF; -; .
PDBsum2V9H; -; .
PDBsum3EFC; -; .
ProteinModelPortalP0A940; -; .
SMRP0A940; 23-421; .
DIPDIP-36019N; -; .
IntActP0A940; 4; .
SWISS-2DPAGEP0A940; -; .
2DBase-EcoliP0A940; -; .
PRIDEP0A940; -; .
EnsemblBacteriaEBESCT00000003997; EBESCP00000003997; EBESCG00000003270; .
EnsemblBacteriaEBESCT00000003998; EBESCP00000003998; EBESCG00000003270; .
EnsemblBacteriaEBESCT00000014908; EBESCP00000014199; EBESCG00000013968; .
GeneID944870; -; .
GenomeReviewsAP009048_GR; JW0172; .
GenomeReviewsU00096_GR; b0177; .
KEGGecj:JW0172; -; .
KEGGeco:b0177; -; .
EchoBASEEB2541; -; .
EcoGeneEG12676; yaeT; .
eggNOGCOG4775; -; .
GeneTreeEBGT00050000010848; -; .
ProtClustDBPRK11067; -; .
BioCycEcoCyc:G6093-MONOMER; -; .
GenevestigatorP0A940; -; .
GOGO:0009279; C:cell outer membrane; IDA:EcoCyc; .
GOGO:0016021; C:integral to membrane; IEA:UniProtKB-KW; .
GOGO:0005886; C:plasma membrane; IEA:UniProtKB-KW; .
GOGO:0051082; F:unfolded protein binding; IPI:EcoCyc; .
GOGO:0043165; P:Gram-negative-bacterium-type cell outer membrane assembly; IDA:EcoCyc; .
GOGO:0051205; P:protein insertion into membrane; IDA:EcoCyc; .
HAMAPMF_01430; OM_assembly_YaeT; 1; -
InterProIPR000184; Bac_surfAg_D15; .
InterProIPR023707; OM_YaeT/YfiO_complex_suYaeT; .
InterProIPR016474; OM_YaeT/YfiO_complex_YaeT-rel; .
InterProIPR010827; Surface_Ag_variable_number; .
PfamPF01103; Bac_surface_Ag; 1; .
PfamPF07244; Surf_Ag_VNR; 5; .
PIRSFPIRSF006076; OM_assembly_OMP85; 1; .
TIGRFAMsTIGR03303; OM_YaeT; 1; .


SWISS-2DPAGE (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server