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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P0ABB4




SWISS-2DPAGE: P0ABB4



P0ABB4:

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ID   ATPB_ECOLI; STANDARD; 2DG.
AC   P0ABB4; P00824;
DT   01-AUG-1995, integrated into SWISS-2DPAGE (release 2).
DT   31-MAR-2004, 2D annotation version 6.
DT   19-MAY-2011, general annotation version 11.
DE   RecName: Full=ATP synthase subunit beta; EC=3.6.3.14; AltName: Full=ATP
DE   synthase F1 sector subunit beta; AltName: Full=F-ATPase subunit beta;.
GN   Name=atpD; Synonyms=papB, uncD; OrderedLocusNames=b3732, JW3710;
OS   Escherichia coli.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Escherichia.
OX   NCBI_TaxID=562;
MT   ECOLI, ECOLI4-5, ECOLI4.5-5.5, ECOLI-DIGE4.5-6.5.
IM   ECOLI, ECOLI4-5, ECOLI4.5-5.5, ECOLI-DIGE4.5-6.5.
RN   [1]
RP   MAPPING ON GEL.
RX   MEDLINE=96314059; PubMed=8740179; [NCBI, ExPASy, EBI, Israel, Japan]
RA   Pasquali C., Frutiger S., Wilkins M.R., Hughes G.J., Appel R.D., Bairoch
RA   A., Schaller D., Sanchez J.-C., Hochstrasser D.F.;
RT   ''''''Two-dimensional gel electrophoresis of Escherichia coli
RT   homogenates: the Escherichia coli SWISS-2DPAGE database'';'';'';
RL   Electrophoresis 17(1):547-555(1996).
RN   [2]
RP   MAPPING ON GEL.
RA   Vanbogelen R.A., Abshire K.Z., Pertsemlidis A., Clark R.L., Neidhardt F.C.;
RT   ''''''Gene-protein database of Escherichia coli K-12, edition 6'';'';'';
RL   (IN) Neidhardt et al. (eds.);
RL   Escherichia coli and Salmonella: Cellular and Molecular Biology (2nd
RL   ed.), pp.2067-2117, ASM Press, Washington DC (1996).
RN   [3]
RP   MAPPING ON GEL.
RX   PubMed=11680886; [NCBI, ExPASy, EBI, Israel, Japan]
RA   Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F.,
RA   Sanchez J.-C.;
RT   ''''''New perspectives in the Escherichia coli proteome investigation'';'';'';
RL   Proteomics 1(1):409-423(2001).
RN   [4]
RP   MAPPING ON GEL.
RX   PubMed=12469338; [NCBI, ExPASy, EBI, Israel, Japan]
RA   Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S.;
RT   ''''''Fluorescence 2-D difference gel electrophoresis and mass
RT   spectrometry based proteomic analysis of E. coli'';'';'';
RL   Proteomics 2(1):1682-1698(2002).
CC   -!- SUBUNIT: F-TYPE ATPASES HAVE 2 COMPONENTS, CF(1) - THE CATALYTIC CORE
CC         - AND CF(0) - THE MEMBRANE PROTON CHANNEL; CF(1) HAS FIVE SUBUNITS:
CC         ALPHA(3), BETA(3), GAMMA(1), DELTA(1), EPSILON(1); CF(0) HAS THREE MAIN
CC         SUBUNITS: A, B AND C
2D   -!- MASTER: ECOLI;
2D   -!-   PI/MW: SPOT 2D-000KUF=4.90/47816;
2D   -!-   MAPPING: AMINO ACID COMPOSITION AND MICROSEQUENCE ANALYSIS [1] AND
2D         IDENTIFIED ON 2-D GELS BY VANBOGELEN [2].
2D   -!- MASTER: ECOLI4-5;
2D   -!-   PI/MW: SPOT 2D-001HHU=4.95/47782;
2D   -!-   PI/MW: SPOT 2D-001HJ0=4.95/43643;
2D   -!-   PI/MW: SPOT 2D-001HJ1=4.55/43745;
2D   -!-   PEPTIDE MASSES: SPOT 2D-001HHU: 1366.714; 1450.812; 1506.716;
2D         1608.946; 1676.778; 1790.852; 1905.953; 2151.245; TRYPSIN.
2D   -!-   PEPTIDE MASSES: SPOT 2D-001HJ0: 900.518; 1366.767; 1450.804;
2D         1506.752; 1608.969; 1676.814; 1840.897; 1905.971; 2003.052; 2151.196;
2D         2179.13; 2338.165; TRYPSIN.
2D   -!-   PEPTIDE MASSES: SPOT 2D-001HJ1: 900.551; 918.458; 1107.594;
2D         1122.619; 1263.73; 1332.747; 1366.782; 1450.851; 1506.781; 1609.017;
2D         1660.888; 1676.887; 1824.043; 1840.995; TRYPSIN.
2D   -!-   MAPPING: Peptide mass fingerprinting [3]; SPOT 2D-001HJ0: GEL
2D         MATCHING WITH MASTER ECOLI4.5-5.5 [3].
2D   -!- MASTER: ECOLI4.5-5.5;
2D   -!-   PI/MW: SPOT 2D-0014XV=5.00/45494;
2D   -!-   PI/MW: SPOT 2D-0014ZV=4.96/42905;
2D   -!-   PEPTIDE MASSES: SPOT 2D-0014XV: 1366.61; 1450.65; 1506.57; 1608.78;
2D         1676.65; 1840.72; 1905.72; 2002.83; 2150.93; 2178.87; 2337.89; 2345.01; TRYPSIN.
2D   -!-   MAPPING: Peptide mass fingerprinting and microsequencing (ATGKI) [3].
2D   -!- MASTER: ECOLI-DIGE4.5-6.5;
2D   -!-   PI/MW: SPOT 2D-001WJK=4.99/48103;
2D   -!-   PI/MW: SPOT 2D-001WJO=4.96/48103;
2D   -!-   PEPTIDE MASSES: SPOT 2D-001WJK: 900.47; 961.45; 1094.53; 1366.61;
2D         1450.66; 1506.59; 1608.8; 1823.74; 1840.74; 1905.75; 1957.81; 2002.82;
2D         2150.96; 2178.84; 3816.37; TRYPSIN.
2D   -!-   PEPTIDE MASSES: SPOT 2D-001WJO: 900.55; 961.51; 1138.57; 1831.03;
2D         1841.01; 2003.13; TRYPSIN.
2D   -!-   PEPTIDE SEQUENCES: SPOT 2D-001WJK: (K)IVQVIGAVVDVEFPQDAVPR(V),5-24;
2D         (R)VYDALEVQNGNER(L),25-37; (R)LVLEVQQQLGGGIVR(T),38-52;
2D         (R)GLDVKDLEHPIEVPVGK(A),65-81; (K)VGLFGGAGVGK(T),145-155;
2D         (R)NIAIEHSGYSVFAGVGER(T),165-182; (R)YTLAGTEVSALLGR(M),247-260;
2D         (R)QIASLGIYPAVDPLDSTSR(Q),324-342; (R)GVQSILQR(Y),359-366; (R)FLSQPFFVAEVFTGSPGK(Y),399-416.
2D   -!-   EXPRESSION: decrease after benzoic acid treatment [4].
2D   -!-   MAPPING: Peptide mass fingerprinting [4]; SPOT 2D-001WJK: TANDEM
2D         MASS SPECTROMETRY [4].
CC   ---------------------------------------------------------------------------
CC   This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics.
CC   There are no restrictions on its use by non-profit institutions as long as
CC   its content is in no way modified and this statement is not removed.
CC   Usage by and for commercial entities requires a license agreement (See
CC   http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
CC   ---------------------------------------------------------------------------
DR   2DBase-Ecoli; P0ABB4; ATPB_ECOLI.
DR   ECO2DBASE; B046.7; 6TH EDITION.
DR   UniProtKB/Swiss-Prot; P0ABB4; ATPB_ECOLI.
//


The following 2-D maps are available for this protein:
Escherichia coli
ECOLI
Escherichia coli(4-5)
ECOLI4-5
Escherichia coli(4.5-5.5)
ECOLI4.5-5.5
Escherichia coli DIGE (4.5-6.5)
ECOLI-DIGE4.5-6.5
  


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SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server