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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis


Searching in 'SWISS-2DPAGE' for entry matching: P0AGE0




SWISS-2DPAGE:  P0AGE0

P0AGE0


General information about the entry
View entry in simple text format
Entry nameSSB_ECOLI
Primary accession numberP0AGE0
Secondary accession number(s) P02339
integrated into SWISS-2DPAGE on April 1, 2000 (release 12)
2D Annotations were last modified onMarch 31, 2004 (version 1)
General Annotations were last modified on May 19, 2011 (version 10)
Name and origin of the protein
DescriptionRecName: Full=Single-stranded DNA-binding protein; Short=SSB; AltName: Full=Helix-destabilizing protein;.
Gene nameName=ssb
Synonyms=exrB, lexC
OrderedLocusNames=b4059, JW4020
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
PubMed=11680886; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI5-6 {Escherichia coli(5-6)}
Escherichia coli
ECOLI5-6
  map experimental info
  protein estimated location 		 
ECOLI5-6

MAP LOCATIONS:
pI=5.41; Mw=23874  [identification data]
pI=5.46; Mw=19137  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
ECO2DBASEF018.8; 6TH EDITION.
UniProtKB/Swiss-ProtP0AGE0; SSB_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameSSB_ECOLI
Primary accession numberP0AGE0
Secondary accession number(s) P02339 Q2M6P5
Sequence was last modified on January 23, 2007 (version 2)
Annotations were last modified on October 19, 2011 (version 59)
Name and origin of the protein
DescriptionRecName: Full=Single-stranded DNA-binding protein; Short=SSB; AltName: Full=Helix-destabilizing protein;
Gene nameName=ssb
Synonyms=exrB, lexC
OrderedLocusNames=b4059, JW4020
Encoded onName=ssb; Synonyms=exrB, lexC; OrderedLocusNames=b4059, JW4020
Keywords3D-structure; Complete proteome; Direct protein sequencing; DNA damage; DNA repair; DNA replication; DNA-binding; Phosphoprotein; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLJ01704; AAA24649.1; -; Genomic_DNA
EMBLU00006; AAC43153.1; -; Genomic_DNA
EMBLU00096; AAC77029.1; -; Genomic_DNA
EMBLAP009048; BAE78061.1; -; Genomic_DNA
PIRB65214; DDEC; .
RefSeqNP_418483.1; NC_000913.2; .
PDB1EQQ; X-ray; 3.20 A; A/B/C/D=1-178
PDB1EYG; X-ray; 2.80 A; A/B/C/D=1-116
PDB1KAW; X-ray; 2.90 A; A/B/C/D=2-136
PDB1QVC; X-ray; 2.20 A; A/B/C/D=1-146
PDB1SRU; X-ray; 3.30 A; A/B/C/D=1-113
PDBsum1EQQ; -; .
PDBsum1EYG; -; .
PDBsum1KAW; -; .
PDBsum1QVC; -; .
PDBsum1SRU; -; .
ProteinModelPortalP0AGE0; -; .
SMRP0AGE0; 2-139; .
DIPDIP-35980N; -; .
IntActP0AGE0; 6; .
SWISS-2DPAGEP0AGE0; -; .
ECO2DBASEF018.8; 6TH EDITION; .
EnsemblBacteriaEBESCT00000004930; EBESCP00000004930; EBESCG00000004023; .
EnsemblBacteriaEBESCT00000004931; EBESCP00000004931; EBESCG00000004023; .
EnsemblBacteriaEBESCT00000004932; EBESCP00000004932; EBESCG00000004023; .
EnsemblBacteriaEBESCT00000018161; EBESCP00000017452; EBESCG00000017216; .
GeneID948570; -; .
GenomeReviewsAP009048_GR; JW4020; .
GenomeReviewsU00096_GR; b4059; .
KEGGecj:JW4020; -; .
KEGGeco:b4059; -; .
EchoBASEEB0969; -; .
EcoGeneEG10976; ssb; .
eggNOGCOG0629; -; .
GeneTreeEBGT00050000011542; -; .
HOGENOMHBG755544; -; .
OMATEVVVDI; -; .
ProtClustDBPRK09010; -; .
BioCycEcoCyc:EG10976-MONOMER; -; .
GenevestigatorP0AGE0; -; .
GOGO:0003697; F:single-stranded DNA binding; IDA:EcoCyc; .
GOGO:0006260; P:DNA replication; IEA:UniProtKB-KW; .
GOGO:0006298; P:mismatch repair; TAS:EcoCyc; .
GOGO:0000725; P:recombinational repair; TAS:EcoCyc; .
GOGO:0009432; P:SOS response; TAS:EcoCyc; .
InterProIPR012340; NA-bd_OB-fold; .
InterProIPR016027; NA-bd_OB-fold-like; .
InterProIPR000424; Primosome_PriB/ssb; .
InterProIPR011344; ssDNA-bd; .
Gene3DG3DSA:2.40.50.140; OB_NA_bd_sub; 1; .
PANTHERPTHR10302; Single_strand_bd; 1; .
PfamPF00436; SSB; 1; .
PIRSFPIRSF002070; SSB; 1; .
SUPFAMSSF50249; Nucleic_acid_OB; 1; .
TIGRFAMsTIGR00621; Ssb; 1; .
PROSITEPS50935; SSB; 1; .


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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server