World-2DPAGE Home
Home  |  Contact

Attention: World-2DPAGE is no longer maintained. Previously submitted data can still be queried at World-2DPAGE Repository.


SWISS-2DPAGE 
Search by  [accession number] *
[description, ID or gene] 
[author names] 
[spot ID / serial number] 
[identification methods] 
[pI / Mw range] 
[combined fields] 

Maps  [experimental info] 
[protein list] 
[graphical interface]

     Select Remote Interfaces
[All Interfaces]
World-2DPAGE Portal
World-2DPAGE Repository

Exclude local DBs
has only effect if a remote
interface is selected
     

Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P12787




SWISS-2DPAGE:  P12787


P12787


General information about the entry
View entry in simple text format
Entry nameCOX5A_MOUSE
Primary accession numberP12787
integrated into SWISS-2DPAGE on September 1, 1998 (release 7)
2D Annotations were last modified onOctober 1, 2001 (version 3)
General Annotations were last modified on May 19, 2011 (version 11)
Name and origin of the protein
DescriptionRecName: Full=Cytochrome c oxidase subunit 5A, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide Va; Flags: Precursor;.
Gene nameName=Cox5a
Annotated speciesMus musculus (Mouse) [TaxID: 10090]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciurognathi; Muroidea; Muridae; Murinae; Mus; Mus.
References
[1]   MAPPING ON GEL
PubMed=11680894; [NCBI, ExPASy, EBI, Israel, Japan]
Sanchez J.-C., Chiappe D., Converset V., Hoogland C., Binz P.-A., Paesano S., Appel R.D., Wang S., Sennitt M., Nolan A., Cawthorne M.A., Hochstrasser D.F.
''''''The mouse SWISS-2DPAGE database: a tool for proteomics study of diabetes and obesity'';'';''
Proteomics 1(1):136-163(2001)
2D PAGE maps for identified proteins
How to interpret a protein

BAT_MOUSE {Brown adipose tissue}
Mus musculus (Mouse)
Tissue: Brown adipose tissue
BAT_MOUSE
  map experimental info
  protein estimated location
 
BAT_MOUSE

MAP LOCATIONS:
pI=5.08; Mw=12037

MAPPING (identification):
GEL MATCHING WITH WAT_MOUSE [1].



LIVER_MOUSE {Liver}
Mus musculus (Mouse)
Tissue: Liver
LIVER_MOUSE
  map experimental info
  protein estimated location
 
LIVER_MOUSE

MAP LOCATIONS:
pI=5.06; Mw=12381  [identification data]

MAPPING (identification):
MICROSEQUENCING [1], AND MASS FINGERPRINTING [1].



MUSCLE_MOUSE {Gastrocnemius muscle}
Mus musculus (Mouse)
Tissue: Gastrocnemius
MUSCLE_MOUSE
  map experimental info
  protein estimated location
 
MUSCLE_MOUSE

MAP LOCATIONS:
pI=5.00; Mw=12485  [identification data]
pI=4.96; Mw=12025  [identification data]

MAPPING (identification):
SPOT 2D-0017UB: MATCHING WITH THE MOUSE LIVER MASTER GEL [1];
SPOT 2D-0017V2: Peptide mass fingerprinting [1].



WAT_MOUSE {White adipose tissue}
Mus musculus (Mouse)
Tissue: White adipose tissue
WAT_MOUSE
  map experimental info
  protein estimated location
 
WAT_MOUSE

MAP LOCATIONS:
pI=5.12; Mw=10453

MAPPING (identification):
MATCHING WITH THE MOUSE LIVER MASTER GEL [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UCD-2DPAGEP12787; COX5A_MOUSE.
UniProtKB/Swiss-ProtP12787; COX5A_MOUSE.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameCOX5A_MOUSE
Primary accession numberP12787
Secondary accession number(s) Q9D2W1
Sequence was last modified on February 5, 2008 (version 2)
Annotations were last modified on October 19, 2011 (version 95)
Name and origin of the protein
DescriptionRecName: Full=Cytochrome c oxidase subunit 5A, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide Va; Flags: Precursor;
Gene nameName=Cox5a
Encoded onName=Cox5a
KeywordsComplete proteome; Direct protein sequencing; Heme; Iron; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Reference proteome; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX15963; CAA34085.1; -; mRNA
EMBLAK018723; BAB31369.1; -; mRNA
EMBLBC034302; AAH34302.1; -; mRNA
IPIIPI00120719; -; .
PIRS05495; S05495; .
RefSeqNP_031773.2; NM_007747.2; .
UniGeneMm.273403; -; .
ProteinModelPortalP12787; -; .
SMRP12787; 42-146; .
IntActP12787; 1; .
STRINGP12787; -; .
PhosphoSiteP12787; -; .
SWISS-2DPAGEP12787; -; .
UCD-2DPAGEP12787; -; .
PRIDEP12787; -; .
EnsemblENSMUST00000000090; ENSMUSP00000000090; ENSMUSG00000000088; .
GeneID12858; -; .
KEGGmmu:12858; -; .
UCSCuc009puz.1; mouse; .
CTD9377; -; .
MGIMGI:88474; Cox5a; .
eggNOGroNOG17446; -; .
GeneTreeENSGT00390000001424; -; .
HOGENOMHBG381551; -; .
HOVERGENHBG051088; -; .
InParanoidP12787; -; .
OMAHHEETFE; -; .
OrthoDBEOG4D7Z71; -; .
PhylomeDBP12787; -; .
NextBio282416; -; .
ArrayExpressP12787; -; .
BgeeP12787; -; .
CleanExMM_COX5A; -; .
GenevestigatorP12787; -; .
GermOnlineENSMUSG00000000088; Mus musculus; .
GOGO:0005743; C:mitochondrial inner membrane; IDA:MGI; .
GOGO:0004129; F:cytochrome-c oxidase activity; IEA:InterPro; .
GOGO:0046872; F:metal ion binding; IEA:UniProtKB-KW; .
InterProIPR003204; Cyt_c_oxidase_su5A; .
Gene3DG3DSA:1.25.40.40; Cyt_c_ox5A; 1; .
PANTHERPTHR14200; Cyt_c_ox5A; 1; .
PfamPF02284; COX5A; 1; .
SUPFAMSSF48479; Cyt_c_ox5A; 1; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server