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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P13029




SWISS-2DPAGE:  P13029


P13029


General information about the entry
View entry in simple text format
Entry nameKATG_ECOLI
Primary accession numberP13029
integrated into SWISS-2DPAGE on October 1, 1998 (release 8)
2D Annotations were last modified onMay 15, 2003 (version 2)
General Annotations were last modified on November 9, 2011 (version 13)
Name and origin of the protein
DescriptionRecName: Full=Catalase-peroxidase; Short=CP; EC=1.11.1.21; AltName: Full=Hydroperoxidase I; Short=HPI; AltName: Full=Peroxidase/catalase;.
Gene nameName=katG
OrderedLocusNames=b3942, JW3914
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
PubMed=11680886; [NCBI, Expasy, EBI, Israel, Japan]
Tonella L., Hoogland C., Binz P.-A., Appel R.D., Hochstrasser D.F., Sanchez J.-C.
''''''New perspectives in the Escherichia coli proteome investigation'';'';''
Proteomics 1(1):409-423(2001)
[2]   MAPPING ON GEL
PubMed=12469338; [NCBI, Expasy, EBI, Israel, Japan]
Yan J.X., Devenish A.T., Wait R., Stone T., Lewis S., Fowler S.
''''''Fluorescence 2-D difference gel electrophoresis and mass spectrometry based proteomic analysis of E. coli'';'';''
Proteomics 2(1):1682-1698(2002)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI4.5-5.5 {Escherichia coli(4.5-5.5)}
Escherichia coli
ECOLI4.5-5.5
  map experimental info
  protein estimated location
 
ECOLI4.5-5.5

MAP LOCATIONS:
pI=5.16; Mw=88816  [identification data]

MAPPING (identification):
Peptide mass fingerprinting [1].



ECOLI-DIGE4.5-6.5 {Escherichia coli DIGE (4.5-6.5)}
Escherichia coli
ECOLI-DIGE4.5-6.5
  map experimental info
  protein estimated location
 
ECOLI-DIGE4.5-6.5

MAP LOCATIONS:
pI=5.18; Mw=77774  [identification data]

EXPRESSION:
decrease after benzoic acid treatment [2].

MAPPING (identification):
Tandem mass spectrometry [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP13029; KATG_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameKATG_ECOLI
Primary accession numberP13029
Secondary accession number(s) Q2M8N8
Sequence was last modified on October 1, 1993 (version 2)
Annotations were last modified on October 19, 2011 (version 123)
Name and origin of the protein
DescriptionRecName: Full=Catalase-peroxidase; Short=CP; EC=1.11.1.21; AltName: Full=Hydroperoxidase I; Short=HPI; AltName: Full=Peroxidase/catalase;
Gene nameName=katG
OrderedLocusNames=b3942, JW3914
Encoded onName=katG; OrderedLocusNames=b3942, JW3914
Keywords3D-structure; Complete proteome; Direct protein sequencing; Heme; Hydrogen peroxide; Iron; Metal-binding; Oxidoreductase; Peroxidase; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM21516; AAA24040.1; -; Genomic_DNA
EMBLU00096; AAC76924.1; -; Genomic_DNA
EMBLAP009048; BAE77368.1; -; Genomic_DNA
EMBLL19201; AAB03074.1; -; Genomic_DNA
EMBLU00006; AAC43048.1; -; Genomic_DNA
PIRA65201; CSECHP; .
RefSeqNP_418377.1; NC_000913.2; .
PDB1U2J; X-ray; 2.30 A; A/B/C/D/E/F/G/H=422-726
PDB1U2K; X-ray; 2.00 A; A=422-726
PDB1U2L; X-ray; 2.30 A; A/B=422-726
PDBsum1U2J; -; .
PDBsum1U2K; -; .
PDBsum1U2L; -; .
ProteinModelPortalP13029; -; .
SMRP13029; 30-725; .
DIPDIP-10053N; -; .
IntActP13029; 10; .
MINTMINT-1304887; -; .
PeroxiBase2394; EcoCP01_K-12; .
SWISS-2DPAGEP13029; -; .
EnsemblBacteriaEBESCT00000004229; EBESCP00000004229; EBESCG00000003452; .
EnsemblBacteriaEBESCT00000015460; EBESCP00000014751; EBESCG00000014520; .
GeneID948431; -; .
GenomeReviewsAP009048_GR; JW3914; .
GenomeReviewsU00096_GR; b3942; .
KEGGecj:JW3914; -; .
KEGGeco:b3942; -; .
EchoBASEEB0506; -; .
EcoGeneEG10511; katG; .
eggNOGCOG0376; -; .
GeneTreeEBGT00050000011618; -; .
HOGENOMHBG285610; -; .
OMAKRHAPSM; -; .
ProtClustDBPRK15061; -; .
BioCycEcoCyc:HYDROPEROXIDI-MONOMER; -; .
BioCycMetaCyc:HYDROPEROXIDI-MONOMER; -; .
GenevestigatorP13029; -; .
GOGO:0005829; C:cytosol; IDA:UniProtKB; .
GOGO:0004096; F:catalase activity; IEA:InterPro; .
GOGO:0020037; F:heme binding; IEA:InterPro; .
GOGO:0042744; P:hydrogen peroxide catabolic process; IEA:UniProtKB-KW; .
HAMAPMF_01961; Catal-peroxid; 1; -
InterProIPR000763; Catalase_peroxidase; .
InterProIPR010255; Haem_peroxidase; .
InterProIPR002016; Haem_peroxidase_pln/fun/bac; .
InterProIPR019794; Peroxidases_AS; .
InterProIPR019793; Peroxidases_heam-ligand_BS; .
PfamPF00141; peroxidase; 2; .
PRINTSPR00460; BPEROXIDASE; .
PRINTSPR00458; PEROXIDASE; .
SUPFAMSSF48113; Peroxidase_super; 2; .
TIGRFAMsTIGR00198; Cat_per_HPI; 1; .
PROSITEPS00435; PEROXIDASE_1; 1; .
PROSITEPS00436; PEROXIDASE_2; 1; .
PROSITEPS50873; PEROXIDASE_4; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server