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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: P39304




SWISS-2DPAGE:  P39304


P39304


General information about the entry
View entry in simple text format
Entry nameULAD_ECOLI
Primary accession numberP39304
integrated into SWISS-2DPAGE on September 1, 1997 (release 6)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 9)
Name and origin of the protein
DescriptionRecName: Full=3-keto-L-gulonate-6-phosphate decarboxylase ulaD; EC=4.1.1.85; AltName: Full=3-dehydro-L-gulonate-6-phosphate decarboxylase; AltName: Full=KGPDC; AltName: Full=L-ascorbate utilization protein D;.
Gene nameName=ulaD
Synonyms=sgaH, yjfV
OrderedLocusNames=b4196, JW4154
Annotated speciesEscherichia coli [TaxID: 562]
TaxonomyBacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
References
[1]   MAPPING ON GEL
MEDLINE=98410772; PubMed=9740056; [NCBI, ExPASy, EBI, Israel, Japan]
Tonella L., Walsh B.J., Sanchez J.-C., Ou K., Wilkins M.R., Tyler M., Frutiger S., Gooley A.A., Pescaru I., Appel R.D., Yan J.X., Bairoch A., Hoogland C., Morch F.S., Hughes G.J., Williams K.L., Hochstrasser D.F.
'''''''98 Escherichia coli SWISS-2DPAGE database update'';'';''
Electrophoresis 19(1):1960-1971(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ECOLI {Escherichia coli}
Escherichia coli
ECOLI
  map experimental info
  protein estimated location
 
ECOLI

MAP LOCATIONS:
pI=5.14; Mw=19595

MAPPING (identification):
AMINO ACID COMPOSITION AND SEQUENCE TAG (MSLP) [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP39304; ULAD_ECOLI.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameULAD_ECOLI
Primary accession numberP39304
Secondary accession number(s) Q2M6A9
Sequence was last modified on February 1, 1995 (version 1)
Annotations were last modified on October 19, 2011 (version 98)
Name and origin of the protein
DescriptionRecName: Full=3-keto-L-gulonate-6-phosphate decarboxylase ulaD; EC=4.1.1.85; AltName: Full=3-dehydro-L-gulonate-6-phosphate decarboxylase; AltName: Full=KGPDC; AltName: Full=L-ascorbate utilization protein D;
Gene nameName=ulaD
Synonyms=sgaH, yjfV
OrderedLocusNames=b4196, JW4154
Encoded onName=ulaD; Synonyms=sgaH, yjfV; OrderedLocusNames=b4196, JW4154
Keywords3D-structure; Carbohydrate metabolism; Complete proteome; Decarboxylase; Lyase; Magnesium; Metal-binding; Reference proteome.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU14003; AAA97092.1; -; Genomic_DNA
EMBLU00096; AAC77153.1; -; Genomic_DNA
EMBLAP009048; BAE78197.1; -; Genomic_DNA
PIRS56421; S56421; .
RefSeqNP_418617.1; NC_000913.2; .
PDB1KV8; X-ray; 1.62 A; A/B=1-216
PDB1KW1; X-ray; 2.20 A; A/B=1-216
PDB1Q6L; X-ray; 1.80 A; A/B=1-216
PDB1Q6O; X-ray; 1.20 A; A/B=1-216
PDB1Q6Q; X-ray; 1.70 A; A/B=1-216
PDB1Q6R; X-ray; 1.76 A; A/B=1-216
PDB1SO3; X-ray; 1.90 A; A/B=1-216
PDB1SO4; X-ray; 1.70 A; A/B=1-216
PDB1SO5; X-ray; 1.80 A; A/B=1-216
PDB1SO6; X-ray; 1.90 A; A/B=1-216
PDB1XBV; X-ray; 1.66 A; A/B=1-216
PDB1XBX; X-ray; 1.81 A; A/B=1-216
PDB1XBY; X-ray; 1.58 A; A/B=1-216
PDB1XBZ; X-ray; 1.80 A; A/B=1-216
PDBsum1KV8; -; .
PDBsum1KW1; -; .
PDBsum1Q6L; -; .
PDBsum1Q6O; -; .
PDBsum1Q6Q; -; .
PDBsum1Q6R; -; .
PDBsum1SO3; -; .
PDBsum1SO4; -; .
PDBsum1SO5; -; .
PDBsum1SO6; -; .
PDBsum1XBV; -; .
PDBsum1XBX; -; .
PDBsum1XBY; -; .
PDBsum1XBZ; -; .
ProteinModelPortalP39304; -; .
SMRP39304; 2-216; .
DIPDIP-10869N; -; .
IntActP39304; 1; .
SWISS-2DPAGEP39304; -; .
EnsemblBacteriaEBESCT00000002473; EBESCP00000002473; EBESCG00000002013; .
EnsemblBacteriaEBESCT00000017092; EBESCP00000016383; EBESCG00000016151; .
GeneID948714; -; .
GenomeReviewsAP009048_GR; JW4154; .
GenomeReviewsU00096_GR; b4196; .
KEGGecj:JW4154; -; .
KEGGeco:b4196; -; .
EchoBASEEB2389; -; .
EcoGeneEG12496; ulaD; .
eggNOGCOG0269; -; .
GeneTreeEBGT00050000008924; -; .
HOGENOMHBG417610; -; .
OMAPIYIFIA; -; .
ProtClustDBPRK13306; -; .
BioCycEcoCyc:G7858-MONOMER; -; .
BioCycMetaCyc:G7858-MONOMER; -; .
GenevestigatorP39304; -; .
GOGO:0033982; F:3-dehydro-L-gulonate-6-phosphate decarboxylase activity; IDA:EcoCyc; .
GOGO:0000287; F:magnesium ion binding; IDA:EcoCyc; .
GOGO:0004590; F:orotidine-5'-phosphate decarboxylase activity; IEA:InterPro; .
GOGO:0006207; P:'de novo' pyrimidine base biosynthetic process; IEA:InterPro; .
GOGO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW; .
GOGO:0019854; P:L-ascorbic acid catabolic process; IEP:EcoCyc; .
HAMAPMF_01267; UlaD; 1; -
InterProIPR023942; 3-keto-L-gulonate6Pdecase_UlaD; .
InterProIPR013785; Aldolase_TIM; .
InterProIPR001754; OMPdeCOase_dom; .
InterProIPR011060; RibuloseP-bd_barrel; .
Gene3DG3DSA:3.20.20.70; Aldolase_TIM; 1; .
PfamPF00215; OMPdecase; 1; .
SMARTSM00934; OMPdecase; 1; .
SUPFAMSSF51366; RibP_bind_barrel; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server