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SWISS-2DPAGE

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It will be discontinued on 31-May-2024.


SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q12906




SWISS-2DPAGE:  Q12906


Q12906


General information about the entry
View entry in simple text format
Entry nameILF3_HUMAN
Primary accession numberQ12906
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=Interleukin enhancer-binding factor 3; AltName: Full=Double-stranded RNA-binding protein 76; Short=DRBP76; AltName: Full=M-phase phosphoprotein 4; Short=MPP4; AltName: Full=Nuclear factor associated with dsRNA; Short=NFAR; AltName: Full=Nuclear factor of activated T-cells 90 kDa; Short=NF-AT-90; AltName: Full=Translational control protein 80; Short=TCP80;.
Gene nameName=ILF3
Synonyms=DRBF, MPHOSPH4, NF90
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
Comments
  • SUBUNIT: Interacts with FUS and SMN proteins and also with HRMT1L2
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=87069  [identification data]
Mw=85677  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ12906; ILF3_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameILF3_HUMAN
Primary accession numberQ12906
Secondary accession number(s) A8K6F2 O43409 Q6P1X1 Q86XY7 Q99544 Q99545 Q9BZH4 Q9BZH5 Q9NQ95 Q9NQ96 Q9NQ97 Q9NQ98 Q9NQ99 Q9NQA0 Q9NQA1 Q9NQA2 Q9NRN2 Q9NRN3 Q9NRN4 Q9UMZ9 Q9UN00 Q9UN84 Q9UNA2
Sequence was last modified on April 12, 2005 (version 3)
Annotations were last modified on October 19, 2011 (version 131)
Name and origin of the protein
DescriptionRecName: Full=Interleukin enhancer-binding factor 3; AltName: Full=Double-stranded RNA-binding protein 76; Short=DRBP76; AltName: Full=M-phase phosphoprotein 4; Short=MPP4; AltName: Full=Nuclear factor associated with dsRNA; Short=NFAR; AltName: Full=Nuclear factor of activated T-cells 90 kDa; Short=NF-AT-90; AltName: Full=Translational control protein 80; Short=TCP80;
Gene nameName=ILF3
Synonyms=DRBF, MPHOSPH4, NF90
Encoded onName=ILF3; Synonyms=DRBF, MPHOSPH4, NF90
Keywords3D-structure; Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Direct protein sequencing; DNA-binding; Methylation; Nucleus; Phosphoprotein; Polymorphism; Reference proteome; Repeat; RNA-binding; Transcription; Transcription regulation.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU10324; AAA20994.1; ALT_SEQ; mRNA
EMBLAF147209; AAD33966.1; -; mRNA
EMBLAF141870; AAD37575.1; -; mRNA
EMBLAJ271741; CAC01121.1; -; Genomic_DNA
EMBLAJ271741; CAC01122.1; -; Genomic_DNA
EMBLAJ271741; CAC01123.1; -; Genomic_DNA
EMBLAJ271741; CAC01124.1; -; Genomic_DNA
EMBLAJ271744; CAC01404.1; -; mRNA
EMBLAJ271745; CAC01405.1; -; mRNA
EMBLAJ271746; CAC01406.1; -; mRNA
EMBLAJ271747; CAC01407.1; -; mRNA
EMBLAF167569; AAD51098.1; -; mRNA
EMBLAF167570; AAD51099.1; -; mRNA
EMBLAF320244; AAK07424.1; -; Genomic_DNA
EMBLAF320228; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320229; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320230; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320231; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320232; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320233; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320234; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320235; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320236; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320237; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320238; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320239; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320240; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320241; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320242; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320243; AAK07424.1; JOINED; Genomic_DNA
EMBLAF320247; AAK07425.1; -; Genomic_DNA
EMBLAF320228; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320229; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320230; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320231; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320232; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320233; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320234; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320235; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320236; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320237; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320238; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320239; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320240; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320241; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320242; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320243; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320245; AAK07425.1; JOINED; Genomic_DNA
EMBLAF320246; AAK07425.1; JOINED; Genomic_DNA
EMBLAK291617; BAF84306.1; -; mRNA
EMBLBC048314; AAH48314.1; ALT_SEQ; mRNA
EMBLBC064836; AAH64836.1; -; mRNA
EMBLX98264; CAA66917.1; -; mRNA
EMBLX98265; CAA66918.1; -; mRNA
EMBLAF202445; AAF82685.1; -; Genomic_DNA
EMBLAF202445; AAF82686.1; -; Genomic_DNA
EMBLAF202445; AAF82687.1; -; Genomic_DNA
EMBLAF007140; AAC19152.1; -; mRNA
IPIIPI00219330; -; .
IPIIPI00298788; -; .
IPIIPI00298789; -; .
IPIIPI00414335; -; .
IPIIPI00556173; -; .
IPIIPI01018179; -; .
PIRB54857; B54857; .
RefSeqNP_001131145.1; NM_001137673.1; .
RefSeqNP_004507.2; NM_004516.3; .
RefSeqNP_036350.2; NM_012218.3; .
RefSeqNP_060090.2; NM_017620.2; .
RefSeqNP_703194.1; NM_153464.2; .
UniGeneHs.465885; -; .
PDB2L33; NMR; -; A=521-600
PDB3P1X; X-ray; 1.90 A; A/B=520-594
PDBsum2L33; -; .
PDBsum3P1X; -; .
ProteinModelPortalQ12906; -; .
SMRQ12906; 403-470; 525-594; .
DIPDIP-29853N; -; .
IntActQ12906; 16; .
MINTMINT-4999319; -; .
STRINGQ12906; -; .
PhosphoSiteQ12906; -; .
SWISS-2DPAGEQ12906; -; .
PRIDEQ12906; -; .
EnsemblENST00000318511; ENSP00000315205; ENSG00000129351; .
GeneID3609; -; .
KEGGhsa:3609; -; .
UCSCuc002mpk.1; human; .
UCSCuc002mpl.1; human; .
UCSCuc002mpm.1; human; .
UCSCuc002mpn.1; human; .
UCSCuc002mpo.1; human; .
CTD3609; -; .
GeneCardsGC19P010342; -; .
H-InvDBHIX0014753; -; .
HGNCHGNC:6038; ILF3; .
HPAHPA001897; -; .
MIM603182; gene; .
neXtProtNX_Q12906; -; .
PharmGKBPA29853; -; .
eggNOGprNOG10416; -; .
GeneTreeENSGT00550000074528; -; .
HOVERGENHBG069915; -; .
InParanoidQ12906; -; .
PhylomeDBQ12906; -; .
NextBio14109; -; .
PMAP-CutDBQ12906; -; .
ArrayExpressQ12906; -; .
BgeeQ12906; -; .
GenevestigatorQ12906; -; .
GermOnlineENSG00000129351; Homo sapiens; .
GOGO:0005739; C:mitochondrion; IDA:HPA; .
GOGO:0005730; C:nucleolus; IEA:UniProtKB-SubCell; .
GOGO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB; .
GOGO:0003677; F:DNA binding; IDA:UniProtKB; .
GOGO:0003725; F:double-stranded RNA binding; IDA:UniProtKB; .
GOGO:0005515; F:protein binding; IPI:UniProtKB; .
GOGO:0000279; P:M phase; NAS:UniProtKB; .
GOGO:0045892; P:negative regulation of transcription; DNA-dependent; IDA:UniProtKB
GOGO:0045893; P:positive regulation of transcription; DNA-dependent; IDA:UniProtKB
GOGO:0006351; P:transcription; DNA-dependent; IEA:UniProtKB-KW
InterProIPR001159; Ds-RNA-bd; .
InterProIPR014720; dsRNA-bd-like; .
InterProIPR006561; DZF; .
Gene3DG3DSA:3.30.160.20; dsRNA-bd-like; 2; .
PfamPF00035; dsrm; 2; .
PfamPF07528; DZF; 1; .
SMARTSM00358; DSRM; 2; .
SMARTSM00572; DZF; 1; .
PROSITEPS50137; DS_RBD; 2; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server