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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q13206




SWISS-2DPAGE:  Q13206


Q13206


General information about the entry
View entry in simple text format
Entry nameDDX10_HUMAN
Primary accession numberQ13206
integrated into SWISS-2DPAGE on November 9, 2001 (release 15)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=Probable ATP-dependent RNA helicase DDX10; EC=3.6.4.13; AltName: Full=DEAD box protein 10;.
Gene nameName=DDX10
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
NUCLEOLI_HELA_1D_HUMAN
  map experimental info
  protein estimated location
 
NUCLEOLI_HELA_1D_HUMAN

MAP LOCATIONS:
Mw=105656  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtQ13206; DDX10_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameDDX10_HUMAN
Primary accession numberQ13206
Secondary accession number(s) B2RCQ3 Q5BJD8
Sequence was last modified on September 27, 2005 (version 2)
Annotations were last modified on September 21, 2011 (version 106)
Name and origin of the protein
DescriptionRecName: Full=Probable ATP-dependent RNA helicase DDX10; EC=3.6.4.13; AltName: Full=DEAD box protein 10;
Gene nameName=DDX10
Encoded onName=DDX10
Keywords3D-structure; ATP-binding; Complete proteome; Helicase; Hydrolase; Nucleotide-binding; Phosphoprotein; Polymorphism; Reference proteome; RNA-binding.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLU28042; AAC50823.1; -; mRNA
EMBLAB040537; BAB18536.1; -; mRNA
EMBLAK315216; BAG37650.1; -; mRNA
EMBLCH471065; EAW67122.1; -; Genomic_DNA
EMBLBC091521; AAH91521.1; -; mRNA
EMBLBC093654; AAH93654.1; -; mRNA
EMBLBC093656; AAH93656.1; -; mRNA
IPIIPI00297900; -; .
RefSeqNP_004389.2; NM_004398.2; .
UniGeneHs.591931; -; .
PDB2PL3; X-ray; 2.15 A; A=47-280
PDBsum2PL3; -; .
ProteinModelPortalQ13206; -; .
SMRQ13206; 47-423; .
IntActQ13206; 1; .
STRINGQ13206; -; .
PhosphoSiteQ13206; -; .
SWISS-2DPAGEQ13206; -; .
PeptideAtlasQ13206; -; .
PRIDEQ13206; -; .
EnsemblENST00000322536; ENSP00000314348; ENSG00000178105; .
GeneID1662; -; .
KEGGhsa:1662; -; .
UCSCuc001pkm.1; human; .
CTD1662; -; .
GeneCardsGC11P104461; -; .
HGNCHGNC:2735; DDX10; .
HPAHPA004691; -; .
MIM601235; gene; .
neXtProtNX_Q13206; -; .
PharmGKBPA27200; -; .
eggNOGprNOG08045; -; .
HOGENOMHBG737336; -; .
HOVERGENHBG102756; -; .
InParanoidQ13206; -; .
OMADADFFKV; -; .
OrthoDBEOG4BK536; -; .
PhylomeDBQ13206; -; .
NextBio6838; -; .
ArrayExpressQ13206; -; .
BgeeQ13206; -; .
CleanExHS_DDX10; -; .
GenevestigatorQ13206; -; .
GermOnlineENSG00000178105; Homo sapiens; .
GOGO:0005524; F:ATP binding; IEA:UniProtKB-KW; .
GOGO:0008026; F:ATP-dependent helicase activity; IEA:InterPro; .
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GOGO:0003724; F:RNA helicase activity; TAS:ProtInc; .
InterProIPR014001; DEAD-like_helicase; .
InterProIPR011545; DNA/RNA_helicase_DEAD/DEAH_N; .
InterProIPR001650; Helicase_C; .
InterProIPR000629; RNA-helicase_DEAD-box_CS; .
InterProIPR014014; RNA_helicase_DEAD_Q_motif; .
PfamPF00270; DEAD; 1; .
PfamPF00271; Helicase_C; 1; .
SMARTSM00487; DEXDc; 1; .
SMARTSM00490; HELICc; 1; .
PROSITEPS00039; DEAD_ATP_HELICASE; 1; .
PROSITEPS51192; HELICASE_ATP_BIND_1; 1; .
PROSITEPS51194; HELICASE_CTER; 1; .
PROSITEPS51195; Q_MOTIF; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server