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SWISS-2DPAGE

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It will be discontinued on 31-May-2024.

Swiss-2DPAGE data (text records and image files) will continue to be available from https://ftp.expasy.org/databases/swiss-2dpage/.


SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: Q96C19




SWISS-2DPAGE:  Q96C19


Q96C19


General information about the entry
View entry in simple text format
Entry nameEFHD2_HUMAN
Primary accession numberQ96C19
integrated into SWISS-2DPAGE on March 31, 2004 (release 17)
2D Annotations were last modified onDecember 30, 2004 (version 1)
General Annotations were last modified on May 19, 2011 (version 5)
Name and origin of the protein
DescriptionRecName: Full=EF-hand domain-containing protein D2; AltName: Full=Swiprosin-1;.
Gene nameName=EFHD2
Synonyms=SWS1
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   MAPPING ON GEL
Vuadens F., Crettaz D., Telenti A., Quadroni M., Duchosal M.A., Schneider P., Tissot J.-D.
''''''New insights into HIV lymphocyte infection'';'';''
(IN) Sanchez J.-C., Corthals G.L., Hochstrasser D.F. (eds.)Biomedical Application of Proteomics, pp.245-262, Wiley-VCH, Weinheim (2004)
2D PAGE maps for identified proteins
How to interpret a protein

LYMPHOCYTE_HUMAN {Lymphocytes}
Homo sapiens (Human)
Tissue: Lymphocyte
LYMPHOCYTE_HUMAN
  map experimental info
  protein estimated location
 
LYMPHOCYTE_HUMAN

MAP LOCATIONS:
pI=4.91; Mw=29086  [identification data]
pI=5.00; Mw=28462  [identification data]

EXPRESSION:
expressed predominantly in CD8 lymphocytes [1].

MAPPING (identification):
MALDI tandem mass spectrometry [1].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
REPRODUCTION-2DPAGEIPI00060181; IPI00060181.
UCD-2DPAGEQ96C19; EFHD2_HUMAN.
UniProtKB/Swiss-ProtQ96C19; EFHD2_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameEFHD2_HUMAN
Primary accession numberQ96C19
Secondary accession number(s) Q5JYW9
Sequence was last modified on December 1, 2001 (version 1)
Annotations were last modified on September 21, 2011 (version 86)
Name and origin of the protein
DescriptionRecName: Full=EF-hand domain-containing protein D2; AltName: Full=Swiprosin-1;
Gene nameName=EFHD2
Synonyms=SWS1
Encoded onName=EFHD2; Synonyms=SWS1
KeywordsAcetylation; Calcium; Complete proteome; Direct protein sequencing; Membrane; Phosphoprotein; Reference proteome; Repeat.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLAL031283; CAI21431.1; -; Genomic_DNA
EMBLCH471167; EAW51720.1; -; Genomic_DNA
EMBLBC007233; AAH07233.1; -; mRNA
EMBLBC014923; AAH14923.1; -; mRNA
EMBLBC023611; AAH23611.1; -; mRNA
EMBLBC068473; AAH68473.1; -; mRNA
IPIIPI00060181; -; .
RefSeqNP_077305.2; NM_024329.5; .
UniGeneHs.465374; -; .
ProteinModelPortalQ96C19; -; .
SMRQ96C19; 88-237; .
MINTMINT-2730606; -; .
STRINGQ96C19; -; .
PhosphoSiteQ96C19; -; .
SWISS-2DPAGEQ96C19; -; .
REPRODUCTION-2DPAGEIPI00060181; -; .
PRIDEQ96C19; -; .
EnsemblENST00000375980; ENSP00000365147; ENSG00000142634; .
GeneID79180; -; .
KEGGhsa:79180; -; .
UCSCuc001awh.1; human; .
CTD79180; -; .
GeneCardsGC01P014256; -; .
H-InvDBHIX0000150; -; .
HGNCHGNC:28670; EFHD2; .
neXtProtNX_Q96C19; -; .
PharmGKBPA134942316; -; .
GeneTreeENSGT00390000012058; -; .
HOGENOMHBG716095; -; .
HOVERGENHBG051446; -; .
InParanoidQ96C19; -; .
OMANKFHDEI; -; .
OrthoDBEOG4THVVM; -; .
PhylomeDBQ96C19; -; .
NextBio68166; -; .
ArrayExpressQ96C19; -; .
BgeeQ96C19; -; .
CleanExHS_EFHD2; -; .
GenevestigatorQ96C19; -; .
GermOnlineENSG00000142634; Homo sapiens; .
GOGO:0045121; C:membrane raft; IEA:UniProtKB-SubCell; .
InterProIPR011992; EF-hand-like_dom; .
InterProIPR018249; EF_HAND_2; .
InterProIPR002048; EF_hand_Ca-bd; .
Gene3DG3DSA:1.10.238.10; EF-Hand_type; 1; .
SMARTSM00054; EFh; 2; .
PROSITEPS00018; EF_HAND_1; FALSE_NEG; .
PROSITEPS50222; EF_HAND_2; 2; .



SWISS-2DPAGE image

SWISS-2DPAGE (search AC)


Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server