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Sample Preparation and Post-separation Analysis

Searching in 'SWISS-2DPAGE' for entry matching: Q9Y221



General information about the entry
View entry in simple text format
Entry nameNIP7_HUMAN
Primary accession numberQ9Y221
Secondary accession number(s) Q9NZZ0
integrated into SWISS-2DPAGE on May 15, 2003 (release 16)
2D Annotations were last modified onMay 15, 2003 (version 1)
General Annotations were last modified on May 19, 2011 (version 7)
Name and origin of the protein
DescriptionRecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog; AltName: Full=KD93;.
Gene nameName=NIP7
ORFNames=CGI-37, HSPC031, HSPC180, OK/SW-cl.76, OK/SW-cl.78
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
PubMed=12429849; [NCBI, Expasy, EBI, Israel, Japan]
Scherl A., Coute Y., Deon C., Calle A., Kindbeiter K., Sanchez J.-C., Greco A., Hochstrasser D.F., Diaz J.-J.
''''''Functional proteomic analysis of human nucleolus'';'';''
Mol. Biol. Cell. 13(1):4100-4109(2002)
2D PAGE maps for identified proteins
How to interpret a protein

NUCLEOLI_HELA_1D_HUMAN {SDS-PAGE of nucleolar proteins from Human HeLa cells}
Homo sapiens (Human)
Tissue: Cervix carcinoma
  map experimental info
  protein estimated location

Mw=21747  [identification data]

MAPPING (identification):
Tandem mass spectrometry [1].

This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See or send email from
UniProtKB/Swiss-ProtQ9Y221; NIP7_HUMAN.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.

External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameNIP7_HUMAN
Primary accession numberQ9Y221
Secondary accession number(s) B2RD04 Q9NZZ0
Sequence was last modified on November 1, 1999 (version 1)
Annotations were last modified on September 21, 2011 (version 90)
Name and origin of the protein
DescriptionRecName: Full=60S ribosome subunit biogenesis protein NIP7 homolog; AltName: Full=KD93;
Gene nameName=NIP7
ORFNames=CGI-37, HSPC031, HSPC180, OK/SW-cl.76, OK/SW-cl.78
Encoded onName=NIP7; ORFNames=CGI-37, HSPC031, HSPC180, OK/SW-cl.76, OK/SW-cl.78
Keywords3D-structure; Alternative splicing; Complete proteome; Nucleus; Polymorphism; Reference proteome; Ribosome biogenesis; RNA-binding.
Copyrighted by the UniProt Consortium, see Distributed under the Creative Commons Attribution-NoDerivs License
EMBLAF132971; AAD27746.1; -; mRNA
EMBLAF085360; AAD40195.1; -; mRNA
EMBLAF161528; AAF29143.1; -; mRNA
EMBLAB062398; BAB93485.1; -; mRNA
EMBLAB062479; BAB93504.1; -; mRNA
EMBLAB112439; BAD05056.1; -; mRNA
EMBLAK315355; BAG37751.1; -; mRNA
EMBLCH471092; EAW83271.1; -; Genomic_DNA
EMBLBC015941; AAH15941.1; -; mRNA
IPIIPI00007175; -; .
IPIIPI00020793; -; .
RefSeqNP_001186363.1; NM_001199434.1; .
RefSeqNP_057185.1; NM_016101.4; .
UniGeneHs.585728; -; .
PDB1SQW; X-ray; 1.90 A; A=1-180
PDB1T5Y; X-ray; 2.50 A; A=1-180
PDBsum1SQW; -; .
PDBsum1T5Y; -; .
ProteinModelPortalQ9Y221; -; .
SMRQ9Y221; 1-176; .
IntActQ9Y221; 2; .
MINTMINT-1472771; -; .
STRINGQ9Y221; -; .
PhosphoSiteQ9Y221; -; .
SWISS-2DPAGEQ9Y221; -; .
PeptideAtlasQ9Y221; -; .
PRIDEQ9Y221; -; .
EnsemblENST00000254940; ENSP00000254940; ENSG00000132603; .
GeneID51388; -; .
KEGGhsa:51388; -; .
UCSCuc002exa.1; human; .
UCSCuc002exb.1; human; .
CTD51388; -; .
GeneCardsGC16P055252; -; .
H-InvDBHIX0013188; -; .
HGNCHGNC:24328; NIP7; .
neXtProtNX_Q9Y221; -; .
PharmGKBPA142671264; -; .
eggNOGprNOG06863; -; .
GeneTreeENSGT00390000003591; -; .
HOGENOMHBG377944; -; .
HOVERGENHBG052625; -; .
InParanoidQ9Y221; -; .
OrthoDBEOG45B1GK; -; .
PhylomeDBQ9Y221; -; .
NextBio54909; -; .
ArrayExpressQ9Y221; -; .
BgeeQ9Y221; -; .
CleanExHS_NIP7; -; .
GenevestigatorQ9Y221; -; .
GermOnlineENSG00000132603; Homo sapiens; .
GOGO:0005730; C:nucleolus; IEA:UniProtKB-SubCell; .
GOGO:0005515; F:protein binding; IPI:UniProtKB; .
GOGO:0003723; F:RNA binding; IEA:UniProtKB-KW; .
GOGO:0042255; P:ribosome assembly; IEA:InterPro; .
InterProIPR002478; PUA; .
InterProIPR015947; PUA-like_domain; .
InterProIPR005155; Rbsml_synth_fac_NIP7-like; .
InterProIPR016686; Ribosomal_synth_fac_NIP7; .
PfamPF03657; UPF0113; 1; .
PIRSFPIRSF017190; Rbsml_synth_fac_NIP7; 1; .
SMARTSM00359; PUA; 1; .
SUPFAMSSF88697; PUA-like; 1; .
PROSITEPS50890; PUA; 1; .


SWISS-2DPAGE (search AC)

Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server