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SWISS-2DPAGE

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SWISS-2DPAGE 
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Sample Preparation and Post-separation Analysis



Searching in 'SWISS-2DPAGE' for entry matching: RBS3B_ARATH




SWISS-2DPAGE:  RBS3B_ARATH


RBS3B_ARATH


General information about the entry
View entry in simple text format
Entry nameRBS3B_ARATH
Primary accession numberP99057
integrated into SWISS-2DPAGE on December 1, 2000 (release 13)
2D Annotations were last modified onOctober 1, 2001 (version 1)
General Annotations were last modified on May 19, 2011 (version 6)
Name and origin of the protein
DescriptionRecName: Full=Ribulose bisphosphate carboxylase small chain 3B, chloroplastic; Short=RuBisCO small subunit 3B; EC=4.1.1.39; Flags: Precursor;.
Gene nameName=RBCS-3B
Synonyms=ATS3B
OrderedLocusNames=At5g38410
ORFNames=MXI10.13
Annotated speciesArabidopsis thaliana (Mouse-ear cress) [TaxID: 3702]
TaxonomyEukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core; eudicotyledons; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
References
[1]   MAPPING ON GEL
Sarazin B., Tonella L., Marques K., Paesano S., Chane-Favre L., Sanchez J.-C., Hochstrasser D.F., Thiellement H.
Submitted (OCT-2000) to SWISS-2DPAGE
[2]   MAPPING ON GEL
MEDLINE=99155804; PubMed=10036779; [NCBI, Expasy, EBI, Israel, Japan]
Santoni V., Rouquie D., Doumas P., Mansion M., Boutry M., Degand H., Dupree P., Packman L., Sherrier J., Prime T., Bauw G., Posada E., Rouze P., Dehais P., Sahnoun I., Barlier I., Rossignol M.
''''''Use of a proteome strategy for tagging proteins present at the plasma membrane'';'';''
Plant J. 16(1):633-641(1998)
2D PAGE maps for identified proteins
How to interpret a protein

ARABIDOPSIS {Arabidopsis thaliana}
Arabidopsis thaliana (Mouse-ear cress)
Tissue: Leaf
ARABIDOPSIS
  map experimental info
  protein estimated location
 
ARABIDOPSIS

MAP LOCATIONS:
pI=5.79; Mw=17718  [identification data]
pI=5.79; Mw=15551  [identification data]
pI=6.07; Mw=17069  [identification data]
pI=6.08; Mw=14843

MAPPING (identification):
SPOTS 1KR5, 1KQE, 1UMS: MASS SPECTROMETRY [2]; SPOTS 1UM*: GEL MATCHING [1] WITH 2-D MAP OF LEAF SOLUBLE PROTEINS FROM PPMdb DATABASE (GHENT, BELGIUM) [2].

Copyright
This SWISS-2DPAGE entry is copyright the Swiss Institute of Bioinformatics. There are no restrictions on its use by non-profit institutions as long as its content is in no way modified and this statement is not removed. Usage by and for commercial entities requires a license agreement (See http://world-2dpage.expasy.org/swiss-2dpage/docs/license.html or send email from legal@sib.swiss).
Cross-references
UniProtKB/Swiss-ProtP10798; RBS3B_ARATH.
2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 2011_10
Entry nameRBS3B_ARATH
Primary accession numberP10798
Secondary accession number(s) Q9FF21
Sequence was last modified on January 23, 2002 (version 2)
Annotations were last modified on October 19, 2011 (version 112)
Name and origin of the protein
DescriptionRecName: Full=Ribulose bisphosphate carboxylase small chain 3B, chloroplastic; Short=RuBisCO small subunit 3B; EC=4.1.1.39; Flags: Precursor;
Gene nameName=RBCS-3B
Synonyms=ATS3B
OrderedLocusNames=At5g38410
ORFNames=MXI10.13
Encoded onName=RBCS-3B; Synonyms=ATS3B; OrderedLocusNames=At5g38410; ORFNames=MXI10.13
KeywordsAlternative splicing; Calvin cycle; Carbon dioxide fixation; Chloroplast; Complete proteome; Lyase; Monooxygenase; Oxidoreductase; Photorespiration; Photosynthesis; Plastid; Reference proteome; Transit peptide.
Copyright
Copyrighted by the UniProt Consortium, see https://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLX14564; CAA32702.1; -; Genomic_DNA
EMBLAB005248; BAB09353.1; -; Genomic_DNA
EMBLCP002688; AED94311.1; -; Genomic_DNA
EMBLAF360124; AAK25834.1; -; mRNA
EMBLAY054552; AAK96743.1; -; mRNA
EMBLAY051025; AAK93702.1; -; mRNA
EMBLAF410314; AAK95300.1; -; mRNA
EMBLAF462822; AAL58912.1; -; mRNA
EMBLAY064686; AAL47390.1; -; mRNA
EMBLAY098970; AAM19980.1; -; mRNA
EMBLBT000721; AAN31863.1; -; mRNA
IPIIPI00545353; -; .
PIRS03719; RKMUB3; .
RefSeqNP_198657.1; NM_123202.3; .
UniGeneAt.20381; -; .
UniGeneAt.24772; -; .
UniGeneAt.46639; -; .
UniGeneAt.49098; -; .
UniGeneAt.70032; -; .
UniGeneAt.70053; -; .
UniGeneAt.71313; -; .
UniGeneAt.74604; -; .
UniGeneAt.75082; -; .
ProteinModelPortalP10798; -; .
SMRP10798; 56-178; .
IntActP10798; 3; .
STRINGP10798; -; .
SWISS-2DPAGEP99057; -; .
PRIDEP10798; -; .
EnsemblPlantsAT5G38410.1; AT5G38410.1; AT5G38410; .
GeneID833828; -; .
GenomeReviewsBA000015_GR; AT5G38410; .
KEGGath:AT5G38410; -; .
NMPDRfig|3702.1.peg.25533; -; .
TAIRAt5g38410; -; .
GeneTreeEPGT00050000018478; -; .
HOGENOMHBG608223; -; .
InParanoidP10798; -; .
OMALPVNRRS; -; .
ProtClustDBPLN02289; -; .
ArrayExpressP10798; -; .
GenevestigatorP10798; -; .
GOGO:0048046; C:apoplast; IDA:TAIR; .
GOGO:0005618; C:cell wall; IDA:TAIR; .
GOGO:0009570; C:chloroplast stroma; IDA:TAIR; .
GOGO:0022626; C:cytosolic ribosome; IDA:TAIR; .
GOGO:0016020; C:membrane; IDA:TAIR; .
GOGO:0009579; C:thylakoid; IDA:TAIR; .
GOGO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW; .
GOGO:0016984; F:ribulose-bisphosphate carboxylase activity; IEA:EC; .
GOGO:0009853; P:photorespiration; IEA:UniProtKB-KW; .
GOGO:0019253; P:reductive pentose-phosphate cycle; IEA:UniProtKB-KW; .
GOGO:0009637; P:response to blue light; IEP:TAIR; .
GOGO:0010218; P:response to far red light; IEP:TAIR; .
GOGO:0010114; P:response to red light; IEP:TAIR; .
InterProIPR024681; RuBisCO_sc; .
InterProIPR000894; RuBisCO_sc_dom; .
InterProIPR024680; RuBisCO_ssu_N; .
Gene3DG3DSA:3.30.190.10; RuBisCO_small; 1; .
PfamPF12338; RbcS; 1; .
PfamPF00101; RuBisCO_small; 1; .
PRINTSPR00152; RUBISCOSMALL; .
SMARTSM00961; RuBisCO_small; 1; .
SUPFAMSSF55239; RuBisCO_small; 1; .



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Database constructed and maintained by SIB, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the Expasy web server